mpicbg.spim.data.SpimDataException: Could not find corresponding ViewSetupId=1 in xml '/lustre/projects/project-akanksha/Akanksha/16-06-22_LZ2_VW_sqhGFPinj_embryoI_25C_5angles_5min_CHORION!/dataset.job_01.xml'

GitHub | schmiedc | 9 months ago
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  1. 0

    Merging xml fails

    GitHub | 9 months ago | schmiedc
    mpicbg.spim.data.SpimDataException: Could not find corresponding ViewSetupId=1 in xml '/lustre/projects/project-akanksha/Akanksha/16-06-22_LZ2_VW_sqhGFPinj_embryoI_25C_5angles_5min_CHORION!/dataset.job_01.xml'

    Root Cause Analysis

    1. mpicbg.spim.data.SpimDataException

      Could not find corresponding ViewSetupId=1 in xml '/lustre/projects/project-akanksha/Akanksha/16-06-22_LZ2_VW_sqhGFPinj_embryoI_25C_5angles_5min_CHORION!/dataset.job_01.xml'

      at spim.fiji.plugin.cluster.MergeClusterJobs.merge()
    2. spim.fiji.plugin
      Merge_Cluster_Jobs.run
      1. spim.fiji.plugin.cluster.MergeClusterJobs.merge(MergeClusterJobs.java:66)
      2. spim.fiji.plugin.Merge_Cluster_Jobs.run(Merge_Cluster_Jobs.java:93)
      2 frames
    3. ImageJ
      IJ.run
      1. ij.IJ.runUserPlugIn(IJ.java:199)
      2. ij.IJ.runPlugIn(IJ.java:163)
      3. ij.Executer.runCommand(Executer.java:132)
      4. ij.Executer.run(Executer.java:65)
      5. ij.IJ.run(IJ.java:279)
      5 frames
    4. Java RT
      Method.invoke
      1. sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
      2. sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
      3. sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
      4. java.lang.reflect.Method.invoke(Method.java:597)
      4 frames
    5. BeanShell
      Interpreter.main
      1. bsh.Reflect.invokeMethod(Unknown Source)
      2. bsh.Reflect.invokeStaticMethod(Unknown Source)
      3. bsh.Name.invokeMethod(Unknown Source)
      4. bsh.BSHMethodInvocation.eval(Unknown Source)
      5. bsh.BSHPrimaryExpression.eval(Unknown Source)
      6. bsh.BSHPrimaryExpression.eval(Unknown Source)
      7. bsh.BSHBlock.evalBlock(Unknown Source)
      8. bsh.BSHBlock.eval(Unknown Source)
      9. bsh.BSHBlock.eval(Unknown Source)
      10. bsh.BSHTryStatement.eval(Unknown Source)
      11. bsh.Interpreter.eval(Unknown Source)
      12. bsh.Interpreter.source(Unknown Source)
      13. bsh.Interpreter.main(Unknown Source)
      13 frames
    6. Java RT
      Method.invoke
      1. sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
      2. sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
      3. sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
      4. java.lang.reflect.Method.invoke(Method.java:597)
      4 frames
    7. net.imagej.launcher
      ClassLauncher.main
      1. net.imagej.launcher.ClassLauncher.launch(ClassLauncher.java:258)
      2. net.imagej.launcher.ClassLauncher.run(ClassLauncher.java:184)
      3. net.imagej.launcher.ClassLauncher.main(ClassLauncher.java:76)
      3 frames