java.lang.RuntimeException: failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ]

JIRA | Etienne Morency-Bachand [X] | 5 years ago
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  1. 0

    2011-12-14 10:34:09,914 - ERROR - ort.MethodInvokingRunnable - Invocation of method 'synchronizeIndices' on target class [class org.obiba.opal.search.IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7] failed java.lang.RuntimeException: failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ] at org.obiba.opal.search.es.EsIndexManager$Indexer$1.sendAndCheck(EsIndexManager.java:217) at org.obiba.opal.search.es.EsIndexManager$Indexer$1.onValues(EsIndexManager.java:183) at org.obiba.magma.concurrent.ConcurrentValueTableReader.flushQueue(ConcurrentValueTableReader.java:157) at org.obiba.magma.concurrent.ConcurrentValueTableReader.read(ConcurrentValueTableReader.java:141) at org.obiba.opal.search.es.EsIndexManager$Indexer.index(EsIndexManager.java:154) at org.obiba.opal.search.es.EsIndexManager$Indexer.run(EsIndexManager.java:145) at org.obiba.opal.search.IndexSynchronizationManager.submit(IndexSynchronizationManager.java:83) at org.obiba.opal.search.IndexSynchronizationManager.access$300(IndexSynchronizationManager.java:37) at org.obiba.opal.search.IndexSynchronizationManager$Sync.run(IndexSynchronizationManager.java:119) at org.apache.shiro.subject.support.SubjectRunnable.doRun(SubjectRunnable.java:120) at org.apache.shiro.subject.support.SubjectRunnable.run(SubjectRunnable.java:108) at org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:352) at org.obiba.opal.search.IndexSynchronizationManager.synchronizeIndices(IndexSynchronizationManager.java:58) at org.obiba.opal.search.IndexSynchronizationManager$$FastClassByCGLIB$$d2ecb9d8.invoke(<generated>) at net.sf.cglib.proxy.MethodProxy.invoke(MethodProxy.java:191) at org.springframework.aop.framework.Cglib2AopProxy$CglibMethodInvocation.invokeJoinpoint(Cglib2AopProxy.java:688) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.Cglib2AopProxy$DynamicAdvisedInterceptor.intercept(Cglib2AopProxy.java:621) at org.obiba.opal.search.IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7.synchronizeIndices(<generated>) at sun.reflect.GeneratedMethodAccessor11.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.springframework.util.MethodInvoker.invoke(MethodInvoker.java:273) at org.springframework.scheduling.support.MethodInvokingRunnable.run(MethodInvokingRunnable.java:65) at org.springframework.scheduling.support.DelegatingErrorHandlingRunnable.run(DelegatingErrorHandlingRunnable.java:51) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRunAndReset(FutureTask.java:351) at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:178) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:165) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:267) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:679)

    JIRA | 5 years ago | Etienne Morency-Bachand [X]
    java.lang.RuntimeException: failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ]
  2. 0

    2011-12-14 10:34:09,914 - ERROR - ort.MethodInvokingRunnable - Invocation of method 'synchronizeIndices' on target class [class org.obiba.opal.search.IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7] failed java.lang.RuntimeException: failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ] at org.obiba.opal.search.es.EsIndexManager$Indexer$1.sendAndCheck(EsIndexManager.java:217) at org.obiba.opal.search.es.EsIndexManager$Indexer$1.onValues(EsIndexManager.java:183) at org.obiba.magma.concurrent.ConcurrentValueTableReader.flushQueue(ConcurrentValueTableReader.java:157) at org.obiba.magma.concurrent.ConcurrentValueTableReader.read(ConcurrentValueTableReader.java:141) at org.obiba.opal.search.es.EsIndexManager$Indexer.index(EsIndexManager.java:154) at org.obiba.opal.search.es.EsIndexManager$Indexer.run(EsIndexManager.java:145) at org.obiba.opal.search.IndexSynchronizationManager.submit(IndexSynchronizationManager.java:83) at org.obiba.opal.search.IndexSynchronizationManager.access$300(IndexSynchronizationManager.java:37) at org.obiba.opal.search.IndexSynchronizationManager$Sync.run(IndexSynchronizationManager.java:119) at org.apache.shiro.subject.support.SubjectRunnable.doRun(SubjectRunnable.java:120) at org.apache.shiro.subject.support.SubjectRunnable.run(SubjectRunnable.java:108) at org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:352) at org.obiba.opal.search.IndexSynchronizationManager.synchronizeIndices(IndexSynchronizationManager.java:58) at org.obiba.opal.search.IndexSynchronizationManager$$FastClassByCGLIB$$d2ecb9d8.invoke(<generated>) at net.sf.cglib.proxy.MethodProxy.invoke(MethodProxy.java:191) at org.springframework.aop.framework.Cglib2AopProxy$CglibMethodInvocation.invokeJoinpoint(Cglib2AopProxy.java:688) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.Cglib2AopProxy$DynamicAdvisedInterceptor.intercept(Cglib2AopProxy.java:621) at org.obiba.opal.search.IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7.synchronizeIndices(<generated>) at sun.reflect.GeneratedMethodAccessor11.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.springframework.util.MethodInvoker.invoke(MethodInvoker.java:273) at org.springframework.scheduling.support.MethodInvokingRunnable.run(MethodInvokingRunnable.java:65) at org.springframework.scheduling.support.DelegatingErrorHandlingRunnable.run(DelegatingErrorHandlingRunnable.java:51) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRunAndReset(FutureTask.java:351) at java.util.concurrent.FutureTask.runAndReset(FutureTask.java:178) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:165) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:267) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:679)

    JIRA | 5 years ago | Etienne Morency-Bachand [X]
    java.lang.RuntimeException: failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ]
  3. 0

    [OPAL-1304] Import Data: When importing with a wrong separator (; instead of ,), the entity is created, the jobs succeeds but the server outputs the following error - OBiBa JIRA

    obiba.org | 1 year ago
    java.lang.RuntimeException: failure in bulk execution: : index , type , id , message [MapperParsingException ; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: ]; ] : index , type , id , message [MapperParsingException ; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: ]; ] : index , type , id , message [MapperParsingException ; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: ]; ] : index , type , id , message [MapperParsingException ; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: ]; ] : index , type , id , message [MapperParsingException ; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: ]; ]
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    Root Cause Analysis

    1. java.lang.RuntimeException

      failure in bulk execution: [78]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"RIGHT_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@2757a0e0; line: 1, column: 20]]; ] [86]: index [opal], type [Participant], id [5;"rnijjar";"2009-06-26T10:55:31.000-0400";"2009-06-26T11:00:19.000-0400";;"120002";;;"AUTOMATIC";;"150";;"MANUAL";;"RIGHT";"RIGHT_LEG";"115";"130";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('r' (code 114)): was expecting comma to separate OBJECT entries at [Source: [B@57380af0; line: 1, column: 20]]; ] [92]: index [opal], type [Participant], id [1;"marmstrong";"2009-08-13T10:27:24.000-0400";"2009-08-13T10:32:58.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"168";"BOTH_ARM_ABI";"MANUAL";"MANUAL";"RIGHT";"Right";"120";"170";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('m' (code 109)): was expecting comma to separate OBJECT entries at [Source: [B@6a02e64d; line: 1, column: 20]]; ] [94]: index [opal], type [Participant], id [2;"bdesai";"2009-07-09T11:53:02.000-0400";"2009-07-09T11:53:24.000-0400";;"120002";;;"AUTOMATIC";"RIGHT";"155";"BOTH";"MANUAL";"MANUAL";"RIGHT";"Right";"132";"150";"MANUAL";"AUTOMATIC";"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('b' (code 98)): was expecting comma to separate OBJECT entries at [Source: [B@20563f4c; line: 1, column: 20]]; ] [96]: index [opal], type [Participant], id [4;"tortner";"2009-04-05T15:15:58.000-0400";"2009-04-05T15:16:20.000-0400";;"120002";;;"AUTOMATIC";;"172";"LEFT";"MANUAL";;"RIGHT";"RIGHT_LEG";"128";"142";"MANUAL";;"MANUAL";"MANUAL], message [MapperParsingException[Failed to parse]; nested: JsonParseException[Unexpected character ('t' (code 116)): was expecting comma to separate OBJECT entries at [Source: [B@645dff9a; line: 1, column: 20]]; ]

      at org.obiba.opal.search.es.EsIndexManager$Indexer$1.sendAndCheck()
    2. org.obiba.opal
      EsIndexManager$Indexer$1.onValues
      1. org.obiba.opal.search.es.EsIndexManager$Indexer$1.sendAndCheck(EsIndexManager.java:217)
      2. org.obiba.opal.search.es.EsIndexManager$Indexer$1.onValues(EsIndexManager.java:183)
      2 frames
    3. org.obiba.magma
      ConcurrentValueTableReader.read
      1. org.obiba.magma.concurrent.ConcurrentValueTableReader.flushQueue(ConcurrentValueTableReader.java:157)
      2. org.obiba.magma.concurrent.ConcurrentValueTableReader.read(ConcurrentValueTableReader.java:141)
      2 frames
    4. org.obiba.opal
      IndexSynchronizationManager$Sync.run
      1. org.obiba.opal.search.es.EsIndexManager$Indexer.index(EsIndexManager.java:154)
      2. org.obiba.opal.search.es.EsIndexManager$Indexer.run(EsIndexManager.java:145)
      3. org.obiba.opal.search.IndexSynchronizationManager.submit(IndexSynchronizationManager.java:83)
      4. org.obiba.opal.search.IndexSynchronizationManager.access$300(IndexSynchronizationManager.java:37)
      5. org.obiba.opal.search.IndexSynchronizationManager$Sync.run(IndexSynchronizationManager.java:119)
      5 frames
    5. Shiro
      DelegatingSubject.execute
      1. org.apache.shiro.subject.support.SubjectRunnable.doRun(SubjectRunnable.java:120)
      2. org.apache.shiro.subject.support.SubjectRunnable.run(SubjectRunnable.java:108)
      3. org.apache.shiro.subject.support.DelegatingSubject.execute(DelegatingSubject.java:352)
      3 frames
    6. org.obiba.opal
      IndexSynchronizationManager$$FastClassByCGLIB$$d2ecb9d8.invoke
      1. org.obiba.opal.search.IndexSynchronizationManager.synchronizeIndices(IndexSynchronizationManager.java:58)
      2. org.obiba.opal.search.IndexSynchronizationManager$$FastClassByCGLIB$$d2ecb9d8.invoke(<generated>)
      2 frames
    7. IDEA
      MethodProxy.invoke
      1. net.sf.cglib.proxy.MethodProxy.invoke(MethodProxy.java:191)
      1 frame
    8. Spring AOP
      ReflectiveMethodInvocation.proceed
      1. org.springframework.aop.framework.Cglib2AopProxy$CglibMethodInvocation.invokeJoinpoint(Cglib2AopProxy.java:688)
      2. org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
      2 frames
    9. Spring Tx
      TransactionInterceptor.invoke
      1. org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110)
      1 frame
    10. Spring AOP
      Cglib2AopProxy$DynamicAdvisedInterceptor.intercept
      1. org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
      2. org.springframework.aop.framework.Cglib2AopProxy$DynamicAdvisedInterceptor.intercept(Cglib2AopProxy.java:621)
      2 frames
    11. org.obiba.opal
      IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7.synchronizeIndices
      1. org.obiba.opal.search.IndexSynchronizationManager$$EnhancerByCGLIB$$73ba0bf7.synchronizeIndices(<generated>)
      1 frame
    12. Java RT
      Method.invoke
      1. sun.reflect.GeneratedMethodAccessor11.invoke(Unknown Source)
      2. sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
      3. java.lang.reflect.Method.invoke(Method.java:616)
      3 frames
    13. Spring Core
      MethodInvoker.invoke
      1. org.springframework.util.MethodInvoker.invoke(MethodInvoker.java:273)
      1 frame
    14. Spring Context
      DelegatingErrorHandlingRunnable.run
      1. org.springframework.scheduling.support.MethodInvokingRunnable.run(MethodInvokingRunnable.java:65)
      2. org.springframework.scheduling.support.DelegatingErrorHandlingRunnable.run(DelegatingErrorHandlingRunnable.java:51)
      2 frames
    15. Java RT
      Thread.run
      1. java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
      2. java.util.concurrent.FutureTask$Sync.innerRunAndReset(FutureTask.java:351)
      3. java.util.concurrent.FutureTask.runAndReset(FutureTask.java:178)
      4. java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:165)
      5. java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:267)
      6. java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
      7. java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
      8. java.lang.Thread.run(Thread.java:679)
      8 frames