java.lang.Error

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  • Parsing MNIST test in GZIP on 3 nodes in runit_deeplearning_stacked_autoencoder_large.R On driver node: 07-22 11:17:47.537 172.17.2.164:45000 12693 FJ-0-59 INFO: Parse result for test.hex_2 (10000 rows): onExCompletion for water.fvec.RollupStats$1@32807f5 water.DException$DistributedException: from /172.17.2.164:45000; by class water.fvec.RollupStats$ComputeRollupsTask; class water.DException$DistributedException: from /172.17.2.164:45002; by class water.fvec.RollupStats$Roll; class water.DException$DistributedException: from /172.17.2.164:45004; by class water.fvec.RollupStats$Roll; class java.lang.AssertionError: Missing chunk $05ffba01000014000000$nfs://home2/0xdiag/bigdata/laptop/mnist/test.csv.gz at water.fvec.Vec.chunkIdx(Vec.java:757) at water.fvec.Vec.chunkForChunkIdx(Vec.java:820) at water.MRTask.compute2(MRTask.java:624) at water.MRTask.compute2(MRTask.java:599) at water.MRTask.compute2(MRTask.java:599) at water.MRTask.compute2(MRTask.java:599) at water.H2O$H2OCountedCompleter.compute(H2O.java:947) at jsr166y.CountedCompleter.exec(CountedCompleter.java:429) at jsr166y.ForkJoinTask.doExec(ForkJoinTask.java:263) at jsr166y.ForkJoinPool$WorkQueue.pollAndExecAll(ForkJoinPool.java:914) at jsr166y.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:979) at jsr166y.ForkJoinPool.runWorker(ForkJoinPool.java:1477) at jsr166y.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:104) On remote: 07-22 11:17:47.972 172.17.2.164:45004 12695 FJ-2-5 ERRR: Error: Missing chunk 20 for $04ffba010000ffffffff$nfs://home2/0xdiag/bigdata/laptop/mnist/test.csv.gz java.lang.Error at water.fvec.Vec.checkMissing(Vec.java:763) at water.fvec.Vec.chunkIdx(Vec.java:757) at water.fvec.Vec.chunkForChunkIdx(Vec.java:820) at water.MRTask.compute2(MRTask.java:624) at water.H2O$H2OCountedCompleter.compute(H2O.java:947) at jsr166y.CountedCompleter.exec(CountedCompleter.java:429) at jsr166y.ForkJoinTask.doExec(ForkJoinTask.java:263) at jsr166y.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:974) at jsr166y.ForkJoinPool.runWorker(ForkJoinPool.java:1477) at jsr166y.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:104)
    via by Arno Candel,
  • Parsing MNIST test in GZIP on 3 nodes in runit_deeplearning_stacked_autoencoder_large.R On driver node: 07-22 11:17:47.537 172.17.2.164:45000 12693 FJ-0-59 INFO: Parse result for test.hex_2 (10000 rows): onExCompletion for water.fvec.RollupStats$1@32807f5 water.DException$DistributedException: from /172.17.2.164:45000; by class water.fvec.RollupStats$ComputeRollupsTask; class water.DException$DistributedException: from /172.17.2.164:45002; by class water.fvec.RollupStats$Roll; class water.DException$DistributedException: from /172.17.2.164:45004; by class water.fvec.RollupStats$Roll; class java.lang.AssertionError: Missing chunk $05ffba01000014000000$nfs://home2/0xdiag/bigdata/laptop/mnist/test.csv.gz at water.fvec.Vec.chunkIdx(Vec.java:757) at water.fvec.Vec.chunkForChunkIdx(Vec.java:820) at water.MRTask.compute2(MRTask.java:624) at water.MRTask.compute2(MRTask.java:599) at water.MRTask.compute2(MRTask.java:599) at water.MRTask.compute2(MRTask.java:599) at water.H2O$H2OCountedCompleter.compute(H2O.java:947) at jsr166y.CountedCompleter.exec(CountedCompleter.java:429) at jsr166y.ForkJoinTask.doExec(ForkJoinTask.java:263) at jsr166y.ForkJoinPool$WorkQueue.pollAndExecAll(ForkJoinPool.java:914) at jsr166y.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:979) at jsr166y.ForkJoinPool.runWorker(ForkJoinPool.java:1477) at jsr166y.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:104) On remote: 07-22 11:17:47.972 172.17.2.164:45004 12695 FJ-2-5 ERRR: Error: Missing chunk 20 for $04ffba010000ffffffff$nfs://home2/0xdiag/bigdata/laptop/mnist/test.csv.gz java.lang.Error at water.fvec.Vec.checkMissing(Vec.java:763) at water.fvec.Vec.chunkIdx(Vec.java:757) at water.fvec.Vec.chunkForChunkIdx(Vec.java:820) at water.MRTask.compute2(MRTask.java:624) at water.H2O$H2OCountedCompleter.compute(H2O.java:947) at jsr166y.CountedCompleter.exec(CountedCompleter.java:429) at jsr166y.ForkJoinTask.doExec(ForkJoinTask.java:263) at jsr166y.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:974) at jsr166y.ForkJoinPool.runWorker(ForkJoinPool.java:1477) at jsr166y.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:104)
    via by Arno Candel,
    • java.lang.Error at water.fvec.Vec.checkMissing(Vec.java:763) at water.fvec.Vec.chunkIdx(Vec.java:757) at water.fvec.Vec.chunkForChunkIdx(Vec.java:820) at water.MRTask.compute2(MRTask.java:624) at water.H2O$H2OCountedCompleter.compute(H2O.java:947) at jsr166y.CountedCompleter.exec(CountedCompleter.java:429) at jsr166y.ForkJoinTask.doExec(ForkJoinTask.java:263) at jsr166y.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:974) at jsr166y.ForkJoinPool.runWorker(ForkJoinPool.java:1477) at jsr166y.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:104)
    No Bugmate found.