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  • Stack trace

    • net.sf.samtools.util.RuntimeIOException: File not found: at net.sf.samtools.util.BinaryCodec.<init>( at net.sf.samtools.util.BlockCompressedOutputStream.<init>( at net.sf.samtools.BAMFileWriter.<init>( at net.sf.samtools.SAMFileWriterFactory.makeBAMWriter( at net.sf.samtools.SAMFileWriterFactory.makeBAMWriter( at net.sf.samtools.SAMFileWriterFactory.makeSAMOrBAMWriter( at net.sf.picard.sam.ReorderSam.doWork( at net.sf.picard.cmdline.CommandLineProgram.instanceMain( at net.sf.picard.cmdline.CommandLineProgram.instanceMainWithExit( at net.sf.picard.sam.ReorderSam.main( Caused by: (No such file or directory) at Method) at<init>( at<init>( at net.sf.samtools.util.BinaryCodec.<init>( ... 9 more

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