scheduler.TaskSetManager

Lost task 1.0 in stage 5.0 (TID 11, rz-data-hdp-dn2113.rz.***.com): java.lang.UnsatisfiedLinkError: /data8/hadoop/yarn/nm-local-dir/usercache/hadoop-pay-dev/appcache/application_1468926081807_765036/container_1468926081807_765036_01_000003/tmp/libxgboost4j4481460359283600466.so: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /data8/hadoop/yarn/nm-local-dir/usercache/hadoop-pay-dev/appcache/application_1468926081807_765036/container_1468926081807_765036_01_000003/tmp/libxgboost4j4481460359283600466.so)

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Stack trace

  • scheduler.TaskSetManager: Lost task 1.0 in stage 5.0 (TID 11, rz-data-hdp-dn2113.rz.***.com): java.lang.UnsatisfiedLinkError: /data8/hadoop/yarn
  • m-local-dir/usercache/hadoop-pay-dev/appcache/application_1468926081807_765036/container_1468926081807_765036_01_000003/tmp/libxgboost4j4481460359283600466.so: /lib64/libc.so.6: version `GLIBC_2.14' not found (required by /data8/hadoop/yarn
  • m-local-dir/usercache/hadoop-pay-dev/appcache/application_1468926081807_765036/container_1468926081807_765036_01_000003/tmp/libxgboost4j4481460359283600466.so) at java.lang.ClassLoader$NativeLibrary.load(Native Method) at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1965) at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1890) at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1851) at java.lang.Runtime.load0(Runtime.java:795) at java.lang.System.load(System.java:1062) at ml.dmlc.xgboost4j.java.NativeLibLoader.loadLibraryFromJar(NativeLibLoader.java:67) at ml.dmlc.xgboost4j.java.NativeLibLoader.smartLoad(NativeLibLoader.java:153) at ml.dmlc.xgboost4j.java.NativeLibLoader.initXGBoost(NativeLibLoader.java:41) at ml.dmlc.xgboost4j.java.Rabit.<clinit>(Rabit.java:18) at ml.dmlc.xgboost4j.scala.spark.XGBoost$$anonfun$buildDistributedBoosters$1.apply(XGBoost.scala:63) at ml.dmlc.xgboost4j.scala.spark.XGBoost$$anonfun$buildDistributedBoosters$1.apply(XGBoost.scala:61) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$17.apply(RDD.scala:706) at org.apache.spark.rdd.RDD$$anonfun$mapPartitions$1$$anonfun$apply$17.apply(RDD.scala:706) at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:297) at org.apache.spark.CacheManager.getOrCompute(CacheManager.scala:69) at org.apache.spark.rdd.RDD.iterator(RDD.scala:262) at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66) at org.apache.spark.scheduler.Task.run(Task.scala:88) at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745)

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