java.io.IOException: No FileSystem for scheme: file

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java.io.IOException: No FileSystem for scheme: file
at org.apache.hadoop.fs.FileSystem.getFileSystemClass(FileSystem.java:2644)
at org.apache.hadoop.fs.FileSystem.createFileSystem(FileSystem.java:2651)
at org.apache.hadoop.fs.FileSystem.access$200(FileSystem.java:92)
at org.apache.hadoop.fs.FileSystem$Cache.getInternal(FileSystem.java:2687)
at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:2669)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:371)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:170)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:355)
at org.hammerlab.guacamole.readsets.ReadSets$.loadFromBAM(ReadSets.scala:173)
at org.hammerlab.guacamole.readsets.ReadSets$.load(ReadSets.scala:157)
at org.hammerlab.guacamole.readsets.ReadSets$$anonfun$4.apply(ReadSets.scala:113)
at org.hammerlab.guacamole.readsets.ReadSets$$anonfun$4.apply(ReadSets.scala:111)
at scala.collection.TraversableLike$WithFilter$$anonfun$map$2.apply(TraversableLike.scala:722)
at scala.collection.Iterator$class.foreach(Iterator.scala:727)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1157)
at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
at scala.collection.AbstractIterable.foreach(Iterable.scala:54)
at org.hammerlab.guacamole.readsets.ReadSets$.apply(ReadSets.scala:111)
at org.hammerlab.guacamole.readsets.ReadSets$.apply(ReadSets.scala:96)
at org.hammerlab.guacamole.commands.jointcaller.SomaticJoint$.inputsToReadSets(SomaticJointCaller.scala:69)
at org.hammerlab.guacamole.commands.jointcaller.SomaticJoint$Caller$.run(SomaticJointCaller.scala:93)
at org.hammerlab.guacamole.commands.jointcaller.SomaticJoint$Caller$.run(SomaticJointCaller.scala:77)
at org.hammerlab.guacamole.commands.SparkCommand.run(SparkCommand.scala:12)
at org.hammerlab.guacamole.commands.Command.run(Command.scala:46)
at org.hammerlab.guacamole.Main$.main(Main.scala:68)
at org.hammerlab.guacamole.Main.main(Main.scala)

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