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via GitHub by GullyAPCBurns
, 1 year ago
Could not initialize class edu.arizona.sista.reach.grounding.ReachKBKeyTransforms$
java.lang.NoClassDefFoundError: Could not initialize class edu.arizona.sista.reach.grounding.ReachKBKeyTransforms$	at edu.arizona.sista.reach.grounding.IMKBProteinMentionLookup.resolve(IMKBProteinMentionLookup.scala:22)	at edu.arizona.sista.reach.grounding.ReachEntityLookup$$anonfun$augmentMention$1.apply(ReachEntityLookup.scala:57)	at edu.arizona.sista.reach.grounding.ReachEntityLookup$$anonfun$augmentMention$1.apply(ReachEntityLookup.scala:56)	at scala.collection.immutable.List.foreach(List.scala:381)	at edu.arizona.sista.reach.grounding.ReachEntityLookup.augmentMention(ReachEntityLookup.scala:56)	at edu.arizona.sista.reach.grounding.ReachEntityLookup.edu$arizona$sista$reach$grounding$ReachEntityLookup$$resolveMention(ReachEntityLookup.scala:46)	at edu.arizona.sista.reach.grounding.ReachEntityLookup$$anonfun$apply$1.apply(ReachEntityLookup.scala:24)	at edu.arizona.sista.reach.grounding.ReachEntityLookup$$anonfun$apply$1.apply(ReachEntityLookup.scala:23)	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:245)	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:245)	at scala.collection.Iterator$class.foreach(Iterator.scala:750)	at scala.collection.AbstractIterator.foreach(Iterator.scala:1202)	at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)	at scala.collection.AbstractIterable.foreach(Iterable.scala:54)	at scala.collection.TraversableLike$class.map(TraversableLike.scala:245)	at scala.collection.AbstractTraversable.map(Traversable.scala:104)	at edu.arizona.sista.reach.grounding.ReachEntityLookup.apply(ReachEntityLookup.scala:23)	at edu.arizona.sista.reach.ReachSystem.extractEntitiesFrom(ReachSystem.scala:114)	at edu.arizona.sista.reach.ReachSystem$$anonfun$2.apply(ReachSystem.scala:65)	at edu.arizona.sista.reach.ReachSystem$$anonfun$2.apply(ReachSystem.scala:65)	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:245)	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:245)	at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)	at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)	at scala.collection.TraversableLike$class.map(TraversableLike.scala:245)	at scala.collection.AbstractTraversable.map(Traversable.scala:104)	at edu.arizona.sista.reach.ReachSystem.extractFrom(ReachSystem.scala:65)	at edu.arizona.sista.reach.ReachCLI$$anonfun$processPapers$2.apply(ReachCLI.scala:114)	at edu.arizona.sista.reach.ReachCLI$$anonfun$processPapers$2.apply(ReachCLI.scala:50)	at scala.collection.parallel.mutable.ParArray$ParArrayIterator.foreach_quick(ParArray.scala:143)	at scala.collection.parallel.mutable.ParArray$ParArrayIterator.foreach(ParArray.scala:136)	at scala.collection.parallel.ParIterableLike$Foreach.leaf(ParIterableLike.scala:972)	at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply$mcV$sp(Tasks.scala:49)	at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply(Tasks.scala:48)	at scala.collection.parallel.Task$$anonfun$tryLeaf$1.apply(Tasks.scala:48)	at scala.collection.parallel.Task$class.tryLeaf(Tasks.scala:51)	at scala.collection.parallel.ParIterableLike$Foreach.tryLeaf(ParIterableLike.scala:969)	at scala.collection.parallel.AdaptiveWorkStealingTasks$WrappedTask$class.internal(Tasks.scala:159)	at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$WrappedTask.internal(Tasks.scala:443)	at scala.collection.parallel.AdaptiveWorkStealingTasks$WrappedTask$class.compute(Tasks.scala:149)	at scala.collection.parallel.AdaptiveWorkStealingForkJoinTasks$WrappedTask.compute(Tasks.scala:443)	at scala.concurrent.forkjoin.RecursiveAction.exec(RecursiveAction.java:160)	at scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260)	at scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339)	at scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979)	at scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107)