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via labkey.org by Unknown author, 1 year ago
XMLStreamException in hasNext()
via labkey.org by Unknown author, 2 years ago
XMLStreamException in hasNext()
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[123448,141]
Message: Element type "analysis_result" must be followed by either attribute specifications, ">" or "/>".	at com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:588)	at org.labkey.api.reader.XMLStreamReaderWrapper.next(XMLStreamReaderWrapper.java:246)	at org.labkey.api.reader.SimpleXMLStreamReader.skipTo(SimpleXMLStreamReader.java:81)	at org.labkey.api.reader.SimpleXMLStreamReader.skipToStart(SimpleXMLStreamReader.java:67)	at org.labkey.ms2.reader.PepXmlLoader$FractionIterator.hasNext(PepXmlLoader.java:104)	at org.labkey.ms2.PepXmlImporter.importRun(PepXmlImporter.java:86)	at org.labkey.ms2.MS2Importer.upload(MS2Importer.java:199)	at org.labkey.ms2.MS2Manager.importRun(MS2Manager.java:585)	at org.labkey.ms2.MS2Manager.addRun(MS2Manager.java:570)	at org.labkey.ms2.ProteinProphetImporter.importRun(ProteinProphetImporter.java:349)	at org.labkey.ms2.ProteinProphetImporter.importFile(ProteinProphetImporter.java:78)	at org.labkey.ms2.pipeline.ProteinProphetPipelineJob.run(ProteinProphetPipelineJob.java:69)	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)	at java.util.concurrent.FutureTask.run(FutureTask.java:138)	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:98)	at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:207)	at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)	at java.lang.Thread.run(Thread.java:619)