java.lang.AssertionError: File not open.

GitHub | jburel | 8 months ago
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    GitHub comment 2496#236554783

    GitHub | 8 months ago | jburel
    java.lang.AssertionError: File not open.

    Root Cause Analysis

    1. java.lang.AssertionError

      File not open.

      at loci.formats.in.SlideBook6Reader.readImagePlaneBuf()
    2. loci.formats.in
      SlideBook6Reader.openBytes
      1. loci.formats.in.SlideBook6Reader.readImagePlaneBuf(Native Method)[SlideBook6Reader.jar:5.2.0-SNAPSHOT]
      2. loci.formats.in.SlideBook6Reader.openBytes(SlideBook6Reader.java:148)[SlideBook6Reader.jar:5.2.0-SNAPSHOT]
      2 frames
    3. loci.formats
      ReaderWrapper.openBytes
      1. loci.formats.ImageReader.openBytes(ImageReader.java:453)[formats-api.jar:5.2.0-SNAPSHOT]
      2. loci.formats.ChannelFiller.openBytes(ChannelFiller.java:156)[formats-bsd.jar:5.2.0-SNAPSHOT]
      3. loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:225)[formats-bsd.jar:5.2.0-SNAPSHOT]
      4. loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:147)[formats-bsd.jar:5.2.0-SNAPSHOT]
      5. loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:342)[formats-api.jar:5.2.0-SNAPSHOT]
      5 frames
    4. ome.io.bioformats
      BfPixelBuffer.getPlane
      1. ome.io.bioformats.BfPixelsWrapper.getWholePlane(BfPixelsWrapper.java:359)[romio.jar:na]
      2. ome.io.bioformats.BfPixelsWrapper.getPlane(BfPixelsWrapper.java:256)[romio.jar:na]
      3. ome.io.bioformats.BfPixelBuffer.getPlane(BfPixelBuffer.java:180)[romio.jar:na]
      3 frames
    5. omeis.providers.re
      HSBStrategy.render
      1. omeis.providers.re.data.PlaneFactory.createPlane(PlaneFactory.java:201)[rendering.jar:na]
      2. omeis.providers.re.HSBStrategy.getWavelengthData(HSBStrategy.java:103)[rendering.jar:na]
      3. omeis.providers.re.HSBStrategy.makeRenderingTasks(HSBStrategy.java:217)[rendering.jar:na]
      4. omeis.providers.re.HSBStrategy.render(HSBStrategy.java:312)[rendering.jar:na]
      4 frames