java.lang.RuntimeException: java.lang.RuntimeException: No subject specified in request.

Oracle Community | 729043 | 7 years ago
  1. 0

    Acquiring Oracle Spatial Data through WFS

    Oracle Community | 7 years ago | 729043
    java.lang.RuntimeException: java.lang.RuntimeException: No subject specified in request.
  2. 0

    Seeing the following error in the vivo.all.log at startup: 2013-10-02 09:20:00,890 ERROR [RDFServiceSDB] java.lang.RuntimeException: No named subject in statement patterns java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) 2013-10-02 09:20:01,123 ERROR [FileGraphSetup] Unable to process file graph /usr/local/src/vivodata/data/rdf/tbox/filegraph/research-resource-iao.owl java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:215) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) Caused by: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:148) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) ... 31 more Caused by: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) ... 32 more

    Sakai JIRA | 3 years ago | Tim Worrall
    java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns
  3. 0

    Seeing the following error in the vivo.all.log at startup: 2013-10-02 09:20:00,890 ERROR [RDFServiceSDB] java.lang.RuntimeException: No named subject in statement patterns java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) 2013-10-02 09:20:01,123 ERROR [FileGraphSetup] Unable to process file graph /usr/local/src/vivodata/data/rdf/tbox/filegraph/research-resource-iao.owl java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:215) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) Caused by: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:148) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) ... 31 more Caused by: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) ... 32 more

    Sakai JIRA | 3 years ago | Tim Worrall
    java.lang.RuntimeException: No named subject in statement patterns
  4. Speed up your debug routine!

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    Seeing the following error in the vivo.all.log at startup: 2013-10-02 09:20:00,890 ERROR [RDFServiceSDB] java.lang.RuntimeException: No named subject in statement patterns java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) 2013-10-02 09:20:01,123 ERROR [FileGraphSetup] Unable to process file graph /usr/local/src/vivodata/data/rdf/tbox/filegraph/research-resource-iao.owl java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:215) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) Caused by: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:148) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) ... 31 more Caused by: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) ... 32 more

    Sakai JIRA | 3 years ago | Tim Worrall
    java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns
  6. 0

    Seeing the following error in the vivo.all.log at startup: 2013-10-02 09:20:00,890 ERROR [RDFServiceSDB] java.lang.RuntimeException: No named subject in statement patterns java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) 2013-10-02 09:20:01,123 ERROR [FileGraphSetup] Unable to process file graph /usr/local/src/vivodata/data/rdf/tbox/filegraph/research-resource-iao.owl java.lang.RuntimeException: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:215) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:148) at com.hp.hpl.jena.rdf.model.impl.ModelCom.removeAll(ModelCom.java:315) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.updateGraphInDB(FileGraphSetup.java:227) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.readGraphs(FileGraphSetup.java:180) at edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup.contextInitialized(FileGraphSetup.java:90) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.initialize(StartupManager.java:176) at edu.cornell.mannlib.vitro.webapp.startup.StartupManager.contextInitialized(StartupManager.java:65) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135) at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630) at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791) at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771) at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546) at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637) at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563) at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498) at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277) at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321) at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053) at org.apache.catalina.core.StandardHost.start(StandardHost.java:785) at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045) at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445) at org.apache.catalina.core.StandardService.start(StandardService.java:519) at org.apache.catalina.core.StandardServer.start(StandardServer.java:710) at org.apache.catalina.startup.Catalina.start(Catalina.java:581) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:601) at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289) at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414) Caused by: edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:148) at edu.cornell.mannlib.vitro.webapp.dao.jena.RDFServiceGraphBulkUpdater.removeAll(RDFServiceGraphBulkUpdater.java:210) ... 31 more Caused by: java.lang.RuntimeException: No named subject in statement patterns at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.sort(RDFServiceJena.java:229) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeUsingSparqlUpdate(RDFServiceJena.java:178) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.removeBlankNodesWithSparqlUpdate(RDFServiceJena.java:122) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.RDFServiceJena.operateOnModel(RDFServiceJena.java:64) at edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceSDB.changeSetUpdate(RDFServiceSDB.java:119) ... 32 more

    Sakai JIRA | 3 years ago | Tim Worrall
    java.lang.RuntimeException: No named subject in statement patterns

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    Root Cause Analysis

    1. java.lang.RuntimeException

      No subject specified in request.

      at oracle.spatial.ws.WSProperties.getUser()
    2. oracle.spatial.ws
      WFSServlet.doGet
      1. oracle.spatial.ws.WSProperties.getUser(WSProperties.java:574)
      2. oracle.spatial.ws.WSProperties.getProperties(WSProperties.java:695)
      3. oracle.spatial.ws.servlet.WFSServlet.doGet(WFSServlet.java:108)
      3 frames
    3. JavaServlet
      HttpServlet.service
      1. javax.servlet.http.HttpServlet.service(HttpServlet.java:743)
      2. javax.servlet.http.HttpServlet.service(HttpServlet.java:856)
      2 frames
    4. com.evermind.server
      HttpRequestHandler.run
      1. com.evermind.server.http.ServletRequestDispatcher.invoke(ServletRequestDispatcher.java:734)
      2. com.evermind.server.http.ServletRequestDispatcher.forwardInternal(ServletRequestDispatcher.java:391)
      3. com.evermind.server.http.HttpRequestHandler.doProcessRequest(HttpRequestHandler.java:908)
      4. com.evermind.server.http.HttpRequestHandler.processRequest(HttpRequestHandler.java:458)
      5. com.evermind.server.http.HttpRequestHandler.serveOneRequest(HttpRequestHandler.java:226)
      6. com.evermind.server.http.HttpRequestHandler.run(HttpRequestHandler.java:127)
      7. com.evermind.server.http.HttpRequestHandler.run(HttpRequestHandler.java:116)
      7 frames
    5. oracle.oc4j.network
      ServerSocketAcceptHandler$AcceptHandlerHorse.run
      1. oracle.oc4j.network.ServerSocketReadHandler$SafeRunnable.run(ServerSocketReadHandler.java:260)
      2. oracle.oc4j.network.ServerSocketAcceptHandler.procClientSocket(ServerSocketAcceptHandler.java:234)
      3. oracle.oc4j.network.ServerSocketAcceptHandler.access$700(ServerSocketAcceptHandler.java:29)
      4. oracle.oc4j.network.ServerSocketAcceptHandler$AcceptHandlerHorse.run(ServerSocketAcceptHandler.java:879)
      4 frames
    6. com.evermind.util
      ReleasableResourcePooledExecutor$MyWorker.run
      1. com.evermind.util.ReleasableResourcePooledExecutor$MyWorker.run(ReleasableResourcePooledExecutor.java:303)
      1 frame
    7. Java RT
      Thread.run
      1. java.lang.Thread.run(Thread.java:619)
      1 frame