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  • Reordersam bug?
    via GitHub by dthach1
  • Structural Variation Toolkit / Mailing Lists
    via by Unknown author,
  • SAM tools / Mailing Lists
    via by Unknown author,
    • java.lang.IllegalArgumentException: Invalid reference index -1 at htsjdk.samtools.QueryInterval.<init>( at htsjdk.samtools.SamReader$PrimitiveSamReaderToSamReaderAdapter.query( at picard.sam.ReorderSam.doWork( at picard.cmdline.CommandLineProgram.instanceMain( at picard.cmdline.PicardCommandLine.instanceMain( at picard.cmdline.PicardCommandLine.main(
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