com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing.

Atlassian JIRA | Sulka Haro | 1 decade ago
  1. 0

    I tried to associate a new issue level security scheme to a project with 380 issues. The first time I tried this, Jira immediately crashed with an HotSpot error shown below. The second time I tried to validate the problem wasn't just a random fluke, I got the stack traces following the SIGSEGV report. It seems that when I start the security level assigning, Lucene creates two separate lock files into the temp directory but only one of them is referred to in the traces below. # An unexpected error has been detected by HotSpot Virtual Machine: # # SIGSEGV (0xb) at pc=0xb7a0ac41, pid=7603, tid=1839385520 # # Java VM: Java HotSpot(TM) Server VM (1.5.0_05-b05 mixed mode) # Problematic frame: # V [libjvm.so+0x39ec41] # # An error report file with more information is saved as /tmp/hs_err_pid7603.log # # If you would like to submit a bug report, please visit: # http://java.sun.com/webapps/bugreport/crash.jsp 2006-01-17 11:48:32,339 [webwork.dispatcher.ServletDispatcher] Could not execute action com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more 2006-01-17 11:48:32,348 ERROR [[Catalina].[localhost].[/].[action]] Servlet.service() for servlet action threw exception com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more 2006-01-17 11:48:33,688 ERROR [500ErrorPage] Exception caught in 500 page Exception caught whilst deIndexing. com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more

    Atlassian JIRA | 1 decade ago | Sulka Haro
    com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing.
  2. 0

    I tried to associate a new issue level security scheme to a project with 380 issues. The first time I tried this, Jira immediately crashed with an HotSpot error shown below. The second time I tried to validate the problem wasn't just a random fluke, I got the stack traces following the SIGSEGV report. It seems that when I start the security level assigning, Lucene creates two separate lock files into the temp directory but only one of them is referred to in the traces below. # An unexpected error has been detected by HotSpot Virtual Machine: # # SIGSEGV (0xb) at pc=0xb7a0ac41, pid=7603, tid=1839385520 # # Java VM: Java HotSpot(TM) Server VM (1.5.0_05-b05 mixed mode) # Problematic frame: # V [libjvm.so+0x39ec41] # # An error report file with more information is saved as /tmp/hs_err_pid7603.log # # If you would like to submit a bug report, please visit: # http://java.sun.com/webapps/bugreport/crash.jsp 2006-01-17 11:48:32,339 [webwork.dispatcher.ServletDispatcher] Could not execute action com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more 2006-01-17 11:48:32,348 ERROR [[Catalina].[localhost].[/].[action]] Servlet.service() for servlet action threw exception com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more 2006-01-17 11:48:33,688 ERROR [500ErrorPage] Exception caught in 500 page Exception caught whilst deIndexing. com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing. at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:367) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211) at com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71) at com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40) at webwork.action.ActionSupport.execute(ActionSupport.java:153) at com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51) at webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132) at com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178) at javax.servlet.http.HttpServlet.service(HttpServlet.java:802) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148) at org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307) at org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385) at org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748) at org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678) at org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684) at java.lang.Thread.run(Thread.java:595) Caused by: java.io.IOException: Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:432) at org.apache.lucene.index.IndexReader.delete(IndexReader.java:454) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224) at com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361) ... 55 more

    Atlassian JIRA | 1 decade ago | Sulka Haro
    com.atlassian.jira.issue.index.IndexException: Exception caught whilst deIndexing.
  3. 0

    This is a transient bug. I created a space. I created several pages in the space. I uploaded several documents to some of those spaces. I logged out. A couple hours later, I logged back in. I tried to create a new space, it did not work. I received an error. I then tried editing the existing space. I received a similar error. Both errors had this cause: bucket.search.lucene.LuceneException: Cannot update index. I understand that I am just learning to use and administer this as I am evaluating the software. I installed confluence on my server as root and I am starting it up as root. I have am using the built in hypersonic database. Here is as much log output as I could find. Cause: bucket.search.lucene.LuceneException: Cannot update index Stack Trace: [hide] bucket.search.lucene.LuceneException: Cannot update index at bucket.search.lucene.LuceneIndexer.index(LuceneIndexer.java:79) at com.atlassian.confluence.search.lucene.ConfluenceIndexer.index(ConfluenceIndexer.java:13) at bucket.core.persistence.hibernate.HibernateObjectDao.index(HibernateObjectDao.java:209) at bucket.core.persistence.hibernate.HibernateObjectDao.saveRaw(HibernateObjectDao.java:152) at bucket.core.persistence.hibernate.HibernateObjectDao.save(HibernateObjectDao.java:121) at com.atlassian.confluence.core.DefaultContentEntityManager.saveContentEntity(DefaultContentEntityManager.java:36) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:324) at org.springframework.aop.framework.AopProxyUtils.invokeJoinpointUsingReflection(AopProxyUtils.java:59) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:149) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:118) at com.atlassian.confluence.util.profiling.SpringProfilingInterceptor.invoke(SpringProfilingInterceptor.java:16) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:138) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:191) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:138) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:148) at $Proxy10.saveContentEntity(Unknown Source) at com.atlassian.confluence.pages.actions.AbstractCreatePageAction.createPage(AbstractCreatePageAction.java:97) at com.atlassian.confluence.pages.actions.AbstractCreatePageAction.doAdd(AbstractCreatePageAction.java:85) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:324) at com.opensymphony.xwork.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:301) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:168) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.DefaultWorkflowInterceptor.intercept(DefaultWorkflowInterceptor.java:55) at com.atlassian.confluence.core.ConfluenceWorkflowInterceptor.intercept(ConfluenceWorkflowInterceptor.java:33) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.atlassian.confluence.core.ConfluenceValidationInterceptor.intercept(ConfluenceValidationInterceptor.java:16) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.security.actions.PermissionCheckInterceptor.intercept(PermissionCheckInterceptor.java:40) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.pages.actions.PageAwareInterceptor.intercept(PageAwareInterceptor.java:72) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.core.ConfluenceAutowireInterceptor.intercept(ConfluenceAutowireInterceptor.java:25) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.user.actions.AuthenticatedUserInterceptor.intercept(AuthenticatedUserInterceptor.java:67) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.util.XWorkTransactionInterceptor.intercept(XWorkTransactionInterceptor.java:133) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.DefaultActionProxy.execute(DefaultActionProxy.java:115) at com.opensymphony.webwork.dispatcher.ServletDispatcher.serviceAction(ServletDispatcher.java:278) at com.opensymphony.webwork.dispatcher.ServletDispatcher.service(ServletDispatcher.java:248) at javax.servlet.http.HttpServlet.service(HttpServlet.java:853) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:247) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:145) at com.atlassian.confluence.util.profiling.ProfilingPageFilter.parsePage(ProfilingPageFilter.java:158) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:61) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:168) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:181) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:96) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at org.springframework.orm.hibernate.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:117) at bucket.custom.FlushingSpringSessionInViewFilter.doFilterInternal(FlushingSpringSessionInViewFilter.java:30) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:73) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.confluence.util.error.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:26) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:36) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:256) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardContext.invoke(StandardContext.java:2417) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:180) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.valves.ErrorDispatcherValve.invoke(ErrorDispatcherValve.java:171) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:172) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:174) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.coyote.tomcat4.CoyoteAdapter.service(CoyoteAdapter.java:193) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:781) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.processConnection(Http11Protocol.java:549) at org.apache.tomcat.util.net.TcpWorkerThread.runIt(PoolTcpEndpoint.java:589) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:666) at java.lang.Thread.run(Thread.java:534) Caused by: java.io.IOException: Lock obtain timed out: Lock@/export/internal_web/confluence/temp/lucene-1d918f254664f08744279e9454adda87-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:223) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:213) at bucket.search.lucene.LuceneIndexStore.createWriter(LuceneIndexStore.java:56) at bucket.search.lucene.LuceneIndexer.index(LuceneIndexer.java:66) ... 115 more Referer URL: http://www.pathfindercentral.org:8080/pages/createpage.action?spaceKey=java&title=J2EE+Class&linkCreation=true&fromPageId=22 Build Information: Uptime: 2 hours, 5 minutes, 53 seconds Version: 1.2.1 Build Number: 59 Server Information: Application Server: Apache Tomcat/4.1.29 Servlet Version: 2.3 Database Dialect: net.sf.hibernate.dialect.HSQLDialect Memory Information: Total Memory: 127 MB Free Memory: 58 MB Used Memory: 69 MB System Information: System Date: Thursday, 16 Sep 2004 System Time: 13:31:42 System Favourite Colour: Jet Black Java Version: 1.4.2_05 Java Vendor: Sun Microsystems Inc. JVM Version: 1.0 JVM Vendor: Sun Microsystems Inc. JVM Implementation Version: 1.4.2_05-b04 Java Runtime: Java(TM) 2 Runtime Environment, Standard Edition Java VM: Java HotSpot(TM) Client VM User Name: root User Timezone: America/New_York Operating System: Linux 2.4.21-20.ELsmp OS Architecture: i386 Request Information: URL: http://www.pathfindercentral.org:8080/pages/docreatepage.action - Scheme: http - Server: www.pathfindercentral.org - Port: 8080 - URI: /500page.jsp - - Context Path: - - Servlet Path: /500page.jsp - - Path Info: null - - Query String: null Attributes: - com.atlassian.confluence.setup.SpringSessionInViewFilter.sessionFactory : true - javax.servlet.error.message : - javax.servlet.error.exception : java.lang.IllegalStateException: ClobStringType requires active transaction synchronization - os_securityfilter_already_filtered : true - com.atlassian.johnson.filters.JohnsonFilter_already_filtered : true - javax.servlet.error.request_uri : /pages/docreatepage.action - javax.servlet.error.status_code : 500 - __sitemesh__filterapplied : true - javax.servlet.error.servlet_name : action - webwork.valueStack : com.opensymphony.xwork.util.OgnlValueStack@665fb2 - atlassian.core.seraph.original.url : /pages/docreatepage.action - loginfilter.already.filtered : true - javax.servlet.jsp.jspException : bucket.search.lucene.LuceneException: Cannot update index Parameters: - linkCreation = true - selectedText = - fromPageId = 22 - title = J2EE Class - confirm = Add - content = - spaceKey = java - sel1 = - sel2 = - parentPageTitle = Home Logging: 0 log statements generated by this request.

    Atlassian JIRA | 1 decade ago | Matt Jenks
    bucket.search.lucene.LuceneException: Cannot update index
  4. Speed up your debug routine!

    Automated exception search integrated into your IDE

  5. 0

    This is a transient bug. I created a space. I created several pages in the space. I uploaded several documents to some of those spaces. I logged out. A couple hours later, I logged back in. I tried to create a new space, it did not work. I received an error. I then tried editing the existing space. I received a similar error. Both errors had this cause: bucket.search.lucene.LuceneException: Cannot update index. I understand that I am just learning to use and administer this as I am evaluating the software. I installed confluence on my server as root and I am starting it up as root. I have am using the built in hypersonic database. Here is as much log output as I could find. Cause: bucket.search.lucene.LuceneException: Cannot update index Stack Trace: [hide] bucket.search.lucene.LuceneException: Cannot update index at bucket.search.lucene.LuceneIndexer.index(LuceneIndexer.java:79) at com.atlassian.confluence.search.lucene.ConfluenceIndexer.index(ConfluenceIndexer.java:13) at bucket.core.persistence.hibernate.HibernateObjectDao.index(HibernateObjectDao.java:209) at bucket.core.persistence.hibernate.HibernateObjectDao.saveRaw(HibernateObjectDao.java:152) at bucket.core.persistence.hibernate.HibernateObjectDao.save(HibernateObjectDao.java:121) at com.atlassian.confluence.core.DefaultContentEntityManager.saveContentEntity(DefaultContentEntityManager.java:36) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:324) at org.springframework.aop.framework.AopProxyUtils.invokeJoinpointUsingReflection(AopProxyUtils.java:59) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:149) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:118) at com.atlassian.confluence.util.profiling.SpringProfilingInterceptor.invoke(SpringProfilingInterceptor.java:16) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:138) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:191) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:138) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:148) at $Proxy10.saveContentEntity(Unknown Source) at com.atlassian.confluence.pages.actions.AbstractCreatePageAction.createPage(AbstractCreatePageAction.java:97) at com.atlassian.confluence.pages.actions.AbstractCreatePageAction.doAdd(AbstractCreatePageAction.java:85) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:324) at com.opensymphony.xwork.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:301) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:168) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.DefaultWorkflowInterceptor.intercept(DefaultWorkflowInterceptor.java:55) at com.atlassian.confluence.core.ConfluenceWorkflowInterceptor.intercept(ConfluenceWorkflowInterceptor.java:33) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.atlassian.confluence.core.ConfluenceValidationInterceptor.intercept(ConfluenceValidationInterceptor.java:16) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.security.actions.PermissionCheckInterceptor.intercept(PermissionCheckInterceptor.java:40) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.pages.actions.PageAwareInterceptor.intercept(PageAwareInterceptor.java:72) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.core.ConfluenceAutowireInterceptor.intercept(ConfluenceAutowireInterceptor.java:25) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.user.actions.AuthenticatedUserInterceptor.intercept(AuthenticatedUserInterceptor.java:67) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.atlassian.confluence.util.XWorkTransactionInterceptor.intercept(XWorkTransactionInterceptor.java:133) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.interceptor.AroundInterceptor.intercept(AroundInterceptor.java:34) at com.opensymphony.xwork.DefaultActionInvocation.invoke(DefaultActionInvocation.java:163) at com.opensymphony.xwork.DefaultActionProxy.execute(DefaultActionProxy.java:115) at com.opensymphony.webwork.dispatcher.ServletDispatcher.serviceAction(ServletDispatcher.java:278) at com.opensymphony.webwork.dispatcher.ServletDispatcher.service(ServletDispatcher.java:248) at javax.servlet.http.HttpServlet.service(HttpServlet.java:853) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:247) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:145) at com.atlassian.confluence.util.profiling.ProfilingPageFilter.parsePage(ProfilingPageFilter.java:158) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:61) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:168) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:181) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:96) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at org.springframework.orm.hibernate.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:117) at bucket.custom.FlushingSpringSessionInViewFilter.doFilterInternal(FlushingSpringSessionInViewFilter.java:30) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:73) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132) at com.atlassian.confluence.util.error.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:26) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:36) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:256) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardContext.invoke(StandardContext.java:2417) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:180) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.valves.ErrorDispatcherValve.invoke(ErrorDispatcherValve.java:171) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:172) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:174) at org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480) at org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995) at org.apache.coyote.tomcat4.CoyoteAdapter.service(CoyoteAdapter.java:193) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:781) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.processConnection(Http11Protocol.java:549) at org.apache.tomcat.util.net.TcpWorkerThread.runIt(PoolTcpEndpoint.java:589) at org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:666) at java.lang.Thread.run(Thread.java:534) Caused by: java.io.IOException: Lock obtain timed out: Lock@/export/internal_web/confluence/temp/lucene-1d918f254664f08744279e9454adda87-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:223) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:213) at bucket.search.lucene.LuceneIndexStore.createWriter(LuceneIndexStore.java:56) at bucket.search.lucene.LuceneIndexer.index(LuceneIndexer.java:66) ... 115 more Referer URL: http://www.pathfindercentral.org:8080/pages/createpage.action?spaceKey=java&title=J2EE+Class&linkCreation=true&fromPageId=22 Build Information: Uptime: 2 hours, 5 minutes, 53 seconds Version: 1.2.1 Build Number: 59 Server Information: Application Server: Apache Tomcat/4.1.29 Servlet Version: 2.3 Database Dialect: net.sf.hibernate.dialect.HSQLDialect Memory Information: Total Memory: 127 MB Free Memory: 58 MB Used Memory: 69 MB System Information: System Date: Thursday, 16 Sep 2004 System Time: 13:31:42 System Favourite Colour: Jet Black Java Version: 1.4.2_05 Java Vendor: Sun Microsystems Inc. JVM Version: 1.0 JVM Vendor: Sun Microsystems Inc. JVM Implementation Version: 1.4.2_05-b04 Java Runtime: Java(TM) 2 Runtime Environment, Standard Edition Java VM: Java HotSpot(TM) Client VM User Name: root User Timezone: America/New_York Operating System: Linux 2.4.21-20.ELsmp OS Architecture: i386 Request Information: URL: http://www.pathfindercentral.org:8080/pages/docreatepage.action - Scheme: http - Server: www.pathfindercentral.org - Port: 8080 - URI: /500page.jsp - - Context Path: - - Servlet Path: /500page.jsp - - Path Info: null - - Query String: null Attributes: - com.atlassian.confluence.setup.SpringSessionInViewFilter.sessionFactory : true - javax.servlet.error.message : - javax.servlet.error.exception : java.lang.IllegalStateException: ClobStringType requires active transaction synchronization - os_securityfilter_already_filtered : true - com.atlassian.johnson.filters.JohnsonFilter_already_filtered : true - javax.servlet.error.request_uri : /pages/docreatepage.action - javax.servlet.error.status_code : 500 - __sitemesh__filterapplied : true - javax.servlet.error.servlet_name : action - webwork.valueStack : com.opensymphony.xwork.util.OgnlValueStack@665fb2 - atlassian.core.seraph.original.url : /pages/docreatepage.action - loginfilter.already.filtered : true - javax.servlet.jsp.jspException : bucket.search.lucene.LuceneException: Cannot update index Parameters: - linkCreation = true - selectedText = - fromPageId = 22 - title = J2EE Class - confirm = Add - content = - spaceKey = java - sel1 = - sel2 = - parentPageTitle = Home Logging: 0 log statements generated by this request.

    Atlassian JIRA | 1 decade ago | Matt Jenks
    bucket.search.lucene.LuceneException: Cannot update index
  6. 0

    We keep getting the following error over and over again. At one stage we have a build that is running for 2000+ minutes where it normally would only take 50 minutes to run. Build Babylon - Trunk: Could not save the build results (Occurrences 1) (java.io.IOException: Lock obtain timed out: Lock@/tmp/lucene-ed82f3d1b9a2ff1733816749ce5d18d1-write.lock) Strack Trace java.io.IOException: Lock obtain timed out: Lock@/tmp/lucene-ed82f3d1b9a2ff1733816749ce5d18d1-write.lock at org.apache.lucene.store.Lock.obtain(Lock.java:58) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:255) at org.apache.lucene.index.IndexWriter.(IndexWriter.java:225) at com.atlassian.bamboo.index.IndexConnectionManager.getWriter(IndexConnectionManager.java:104) at com.atlassian.bamboo.index.IndexConnectionManager.index(IndexConnectionManager.java:75) at com.atlassian.bamboo.index.DefaultBuildResultsIndexer.indexBuildResultKeepConnection(DefaultBuildResultsIndexer.java:146) at com.atlassian.bamboo.index.DefaultBuildResultsIndexer.indexBuildResult(DefaultBuildResultsIndexer.java:90) at com.atlassian.bamboo.build.pipeline.tasks.SaveBuildTask.call(SaveBuildTask.java:74) at edu.emory.mathcs.backport.java.util.concurrent.FutureTask.run(FutureTask.java:176) at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:987) at edu.emory.mathcs.backport.java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:528) at edu.emory.mathcs.backport.java.util.concurrent.helpers.ThreadHelpers$1.run(ThreadHelpers.java:34) at java.lang.Thread.run(Thread.java:595)

    Atlassian JIRA | 10 years ago | Herry Wiputra
    java.io.IOException: Lock obtain timed out: Lock@/tmp/lucene-ed82f3d1b9a2ff1733816749ce5d18d1-write.lock

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    Root Cause Analysis

    1. java.io.IOException

      Lock obtain timed out: Lock@/home/jira/jira/temp/lucene-c2f2d05a807581e6d8ca495ffc70727c-write.lock

      at org.apache.lucene.store.Lock.obtain()
    2. Lucene
      IndexReader.delete
      1. org.apache.lucene.store.Lock.obtain(Lock.java:58)
      2. org.apache.lucene.index.IndexReader.aquireWriteLock(IndexReader.java:408)
      3. org.apache.lucene.index.IndexReader.delete(IndexReader.java:432)
      4. org.apache.lucene.index.IndexReader.delete(IndexReader.java:454)
      4 frames
    3. com.atlassian.jira
      SelectProjectSecuritySchemeStep2.doExecute
      1. com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssue(DefaultIndexManager.java:224)
      2. com.atlassian.jira.issue.index.DefaultIndexManager.deIndexIssuesAndComments(DefaultIndexManager.java:361)
      3. com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:247)
      4. com.atlassian.jira.issue.index.DefaultIndexManager.reIndexIssues(DefaultIndexManager.java:211)
      5. com.atlassian.jira.issue.index.DefaultIndexManager.reIndex(DefaultIndexManager.java:391)
      6. com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.changeLevels(SelectProjectSecuritySchemeStep2.java:71)
      7. com.atlassian.jira.web.action.admin.issuesecurity.SelectProjectSecuritySchemeStep2.doExecute(SelectProjectSecuritySchemeStep2.java:40)
      7 frames
    4. webwork.action
      ActionSupport.execute
      1. webwork.action.ActionSupport.execute(ActionSupport.java:153)
      1 frame
    5. com.atlassian.jira
      JiraActionSupport.execute
      1. com.atlassian.jira.action.JiraActionSupport.execute(JiraActionSupport.java:51)
      1 frame
    6. webwork.dispatcher
      GenericDispatcher.executeAction
      1. webwork.dispatcher.GenericDispatcher.executeAction(GenericDispatcher.java:132)
      1 frame
    7. com.atlassian.jira
      JiraServletDispatcher.service
      1. com.atlassian.jira.web.dispatcher.JiraServletDispatcher.service(JiraServletDispatcher.java:178)
      1 frame
    8. JavaServlet
      HttpServlet.service
      1. javax.servlet.http.HttpServlet.service(HttpServlet.java:802)
      1 frame
    9. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:252)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    10. com.atlassian.jira
      AccessLogFilter.doFilter
      1. com.atlassian.jira.web.filters.AccessLogFilter.doFilter(AccessLogFilter.java:51)
      1 frame
    11. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    12. Sitemesh
      PageFilter.doFilter
      1. com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119)
      2. com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55)
      2 frames
    13. com.atlassian.jira
      SitemeshExcludePathFilter.doFilter
      1. com.atlassian.jira.web.filters.SitemeshExcludePathFilter.doFilter(SitemeshExcludePathFilter.java:38)
      1 frame
    14. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    15. com.atlassian.seraph
      SecurityFilter.doFilter
      1. com.atlassian.seraph.filter.SecurityFilter.doFilter(SecurityFilter.java:182)
      1 frame
    16. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    17. com.atlassian.seraph
      LoginFilter.doFilter
      1. com.atlassian.seraph.filter.LoginFilter.doFilter(LoginFilter.java:177)
      1 frame
    18. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    19. com.atlassian.util
      ProfilingFilter.doFilter
      1. com.atlassian.util.profiling.filters.ProfilingFilter.doFilter(ProfilingFilter.java:132)
      1 frame
    20. com.atlassian.jira
      ProfilingAndErrorFilter.doFilter
      1. com.atlassian.jira.web.filters.ProfilingAndErrorFilter.doFilter(ProfilingAndErrorFilter.java:25)
      1 frame
    21. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    22. com.atlassian.jira
      ActionCleanupDelayFilter.doFilter
      1. com.atlassian.jira.web.filters.ActionCleanupDelayFilter.doFilter(ActionCleanupDelayFilter.java:37)
      1 frame
    23. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    24. com.atlassian.johnson
      JohnsonFilter.doFilter
      1. com.atlassian.johnson.filters.JohnsonFilter.doFilter(JohnsonFilter.java:91)
      1 frame
    25. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    26. com.atlassian.jira
      GzipFilter.doFilter
      1. com.atlassian.jira.web.filters.gzip.GzipFilter.doFilter(GzipFilter.java:64)
      1 frame
    27. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      2 frames
    28. com.atlassian.core
      AbstractEncodingFilter.doFilter
      1. com.atlassian.core.filters.AbstractEncodingFilter.doFilter(AbstractEncodingFilter.java:37)
      1 frame
    29. Glassfish Core
      CoyoteAdapter.service
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:202)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:173)
      3. org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
      4. org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:178)
      5. org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:126)
      6. org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:105)
      7. org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:107)
      8. org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:148)
      8 frames
    30. Embedded GlassFish Web
      SocketConnection.runIt
      1. org.apache.jk.server.JkCoyoteHandler.invoke(JkCoyoteHandler.java:307)
      2. org.apache.jk.common.HandlerRequest.invoke(HandlerRequest.java:385)
      3. org.apache.jk.common.ChannelSocket.invoke(ChannelSocket.java:748)
      4. org.apache.jk.common.ChannelSocket.processConnection(ChannelSocket.java:678)
      5. org.apache.jk.common.SocketConnection.runIt(ChannelSocket.java:871)
      5 frames
    31. Tomcat Util
      ThreadPool$ControlRunnable.run
      1. org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:684)
      1 frame
    32. Java RT
      Thread.run
      1. java.lang.Thread.run(Thread.java:595)
      1 frame