java.lang.RuntimeException: Cannot read file /mnt/HPC/zepper-tmp/Pia/reference/sh_sequences/shRNAs.fa

seqanswers.com | 6 months ago
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  1. 0

    BBMap (aligner for DNA/RNAseq) is now open-source and available for download. - Page 3 - SEQanswers

    seqanswers.com | 1 year ago
    java.lang.RuntimeException: Cannot read file /mnt/HPC/zepper-tmp/Pia/reference/sh_sequences/shRNAs.fa
  2. 0

    BBMap (aligner for DNA/RNAseq) is now open-source and available for download. [Archive] - SEQanswers

    seqanswers.com | 6 months ago
    java.lang.RuntimeException: Cannot read file /mnt/HPC/zepper-tmp/Pia/reference/sh_sequences/shRNAs.fa
  3. 0

    BBMap (aligner for DNA/RNAseq) is now open-source and available for download. - Page 7 - SEQanswers

    seqanswers.com | 3 months ago
    java.lang.RuntimeException: BBMap terminated in an error state; the output may be corrupt.
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    Root Cause Analysis

    1. java.lang.RuntimeException

      Cannot read file /mnt/HPC/zepper-tmp/Pia/reference/sh_sequences/shRNAs.fa

      at align2.RefToIndex.makeIndex()
    2. align2
      BBMap.main
      1. align2.RefToIndex.makeIndex(RefToIndex.java:28)
      2. align2.BBMap.setup(BBMap.java:238)
      3. align2.AbstractMapper.<init>(AbstractMapper.java:56)
      4. align2.BBMap.<init>(BBMap.java:39)
      5. align2.BBMap.main(BBMap.java:28)
      5 frames