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    • htsjdk.samtools.util.RuntimeIOException: /dev/stdout (Permission denied) at htsjdk.samtools.util.BinaryCodec.close( at htsjdk.samtools.BAMFileWriter.finish( at htsjdk.samtools.SAMFileWriterImpl.close( at picard.sam.FastqToSam.doWork( at picard.cmdline.CommandLineProgram.instanceMain( at picard.cmdline.PicardCommandLine.instanceMain( at picard.cmdline.PicardCommandLine.main( Caused by: /dev/stdout (Permission denied) at Method) at at<init>( at htsjdk.samtools.util.BlockCompressedInputStream.checkTermination( at htsjdk.samtools.util.BlockCompressedOutputStream.close( at at htsjdk.samtools.util.BinaryCodec.close( ... 6 more

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