java.lang.IllegalStateException: Duplicate key name0

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    java.lang.IllegalStateException: Duplicate key chr=13 pos=31789172 ref=T alt=- qual=98.2866 CODING_TRANSCRIPT_INTRON_VARIANT score=0.576238 PASSED failedFilters=[] passedFilters=[Quality, Target, Frequency, Pathogenicity] compatibleWith=[]

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Root Cause Analysis

  1. java.lang.IllegalStateException

    Duplicate key name0

    at java.util.stream.Collectors.lambda$throwingMerger$0()
  2. Java RT
    ReferencePipeline.collect
    1. java.util.stream.Collectors.lambda$throwingMerger$0(Collectors.java:133)
    2. java.util.HashMap.merge(HashMap.java:1253)
    3. java.util.stream.Collectors.lambda$toMap$58(Collectors.java:1320)
    4. java.util.stream.ReduceOps$3ReducingSink.accept(ReduceOps.java:169)
    5. java.util.Spliterators$ArraySpliterator.forEachRemaining(Spliterators.java:948)
    6. java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:481)
    7. java.util.stream.AbstractPipeline.wrapAndCopyInto(AbstractPipeline.java:471)
    8. java.util.stream.ReduceOps$ReduceOp.evaluateSequential(ReduceOps.java:708)
    9. java.util.stream.AbstractPipeline.evaluate(AbstractPipeline.java:234)
    10. java.util.stream.ReferencePipeline.collect(ReferencePipeline.java:499)
    10 frames
  3. Unknown
    Test.main
    1. Test.main(Test.java:11)
    1 frame