java.lang.NoClassDefFoundError: joptsimple/OptionException

GitHub | inodb | 3 months ago
  1. 0

    jsoptsimple OptionException in ImportCancerStudy

    GitHub | 3 months ago | inodb
    java.lang.NoClassDefFoundError: joptsimple/OptionException
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    java.lang.NoClassDefFoundError: org/junit/runner/JUnitCore
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    Stack Overflow | 3 years ago | Kevin
    java.lang.NoClassDefFoundError: org/junit/runner/JUnitCore
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    java.lang.ClassNotFoundException: org.apache.commons.logging.Log

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Root Cause Analysis

  1. java.lang.ClassNotFoundException

    joptsimple.OptionException

    at java.net.URLClassLoader.findClass()
  2. Java RT
    ClassLoader.loadClass
    1. java.net.URLClassLoader.findClass(URLClassLoader.java:381)
    2. java.lang.ClassLoader.loadClass(ClassLoader.java:424)
    3. sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
    4. java.lang.ClassLoader.loadClass(ClassLoader.java:357)
    4 frames
  3. org.mskcc.cbio
    ImportCancerStudy.main
    1. org.mskcc.cbio.portal.scripts.ConsoleRunnable.runInConsole(ConsoleRunnable.java:158)
    2. org.mskcc.cbio.portal.scripts.ImportCancerStudy.main(ImportCancerStudy.java:88)
    2 frames