java.lang.NullPointerException

Google Groups | Mathias Kuhring | 3 months ago
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    QualiMap RNASeq: NullPointerException in GenomicRegionSet.removeFeatureByName()

    Google Groups | 3 months ago | Mathias Kuhring
    java.lang.NullPointerException
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    java.lang.NullPointerException

    Google Groups | 10 months ago | Arnold Liao
    java.lang.NullPointerException
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    Java error running rnaseq modeule with qualimap 2.0

    Google Groups | 2 years ago | Tom Harrop
    java.lang.NullPointerException
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    Android: Saving Map State in Google map

    Stack Overflow | 11 months ago | Junie Negentien
    java.lang.RuntimeException: Unable to resume activity {com.ourThesis.junieNegentien2015/com.ourThesis.junieNegentien2015.MainActivity}: java.lang.NullPointerException

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    Root Cause Analysis

    1. java.lang.NullPointerException

      No message provided

      at org.bioinfo.ngs.qc.qualimap.common.GenomicRegionSet.removeFeatureByName()
    2. org.bioinfo.ngs
      NgsSmartMain.main
      1. org.bioinfo.ngs.qc.qualimap.common.GenomicRegionSet.removeFeatureByName(GenomicRegionSet.java:136)
      2. org.bioinfo.ngs.qc.qualimap.common.GenomicRegionSet.addRegion(GenomicRegionSet.java:107)
      3. org.bioinfo.ngs.qc.qualimap.process.ComputeCountsTask.addRegionToIntervalMap(ComputeCountsTask.java:646)
      4. org.bioinfo.ngs.qc.qualimap.process.ComputeCountsTask.loadRegionsFromGTF(ComputeCountsTask.java:604)
      5. org.bioinfo.ngs.qc.qualimap.process.ComputeCountsTask.initRegions(ComputeCountsTask.java:530)
      6. org.bioinfo.ngs.qc.qualimap.process.ComputeCountsTask.run(ComputeCountsTask.java:424)
      7. org.bioinfo.ngs.qc.qualimap.process.RNASeqQCAnalysis.run(RNASeqQCAnalysis.java:68)
      8. org.bioinfo.ngs.qc.qualimap.main.RnaSeqQcTool.execute(RnaSeqQcTool.java:188)
      9. org.bioinfo.ngs.qc.qualimap.main.NgsSmartTool.run(NgsSmartTool.java:187)
      10. org.bioinfo.ngs.qc.qualimap.main.NgsSmartMain.main(NgsSmartMain.java:111)
      10 frames