org.apache.commons.math3.exception.NotStrictlyPositiveException

0 is smaller than, or equal to, the minimum (0)

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Solutions on the web6

  • 0 is smaller than, or equal to, the minimum (0)
  • -0.457 is smaller than, or equal to, the minimum (0)
  • degrees of freedom (0)
  • Stack trace

    • org.apache.commons.math3.exception.NotStrictlyPositiveException: 0 is smaller than, or equal to, the minimum (0) at org.apache.commons.math3.linear.AbstractRealMatrix.<init>(AbstractRealMatrix.java:68) at org.apache.commons.math3.linear.Array2DRowRealMatrix.<init>(Array2DRowRealMatrix.java:60) at org.broadinstitute.hellbender.tools.exome.SNPSegmenter.writeSegmentFile(SNPSegmenter.java:54) at org.broadinstitute.hellbender.tools.exome.AllelicCNV.calculateAndWriteSNPSegmentation(AllelicCNV.java:370) at org.broadinstitute.hellbender.tools.exome.AllelicCNV.performSNPSegmentationStep(AllelicCNV.java:340) at org.broadinstitute.hellbender.tools.exome.AllelicCNV.runPipeline(AllelicCNV.java:263) at org.broadinstitute.hellbender.engine.spark.SparkCommandLineProgram.doWork(SparkCommandLineProgram.java:38) at org.broadinstitute.hellbender.cmdline.CommandLineProgram.runTool(CommandLineProgram.java:108) at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMainPostParseArgs(CommandLineProgram.java:166) at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMain(CommandLineProgram.java:185) at org.broadinstitute.hellbender.Main.instanceMain(Main.java:76) at org.broadinstitute.hellbender.Main.main(Main.java:92)

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