org.apache.commons.math3.exception.NotStrictlyPositiveException: 0 is smaller than, or equal to, the minimum (0)

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via GitHub by asmirnov239
, 1 year ago
org.apache.commons.math3.exception.NotStrictlyPositiveException: 0 is smaller than, or equal to, the minimum (0)
at org.apache.commons.math3.linear.AbstractRealMatrix.(AbstractRealMatrix.java:68)
at org.broadinstitute.hellbender.tools.exome.SNPSegmenter.writeSegmentFile(SNPSegmenter.java:54)
at org.broadinstitute.hellbender.tools.exome.AllelicCNV.calculateAndWriteSNPSegmentation(AllelicCNV.java:370)
at org.broadinstitute.hellbender.tools.exome.AllelicCNV.performSNPSegmentationStep(AllelicCNV.java:340)
at org.broadinstitute.hellbender.tools.exome.AllelicCNV.runPipeline(AllelicCNV.java:263)
at org.broadinstitute.hellbender.engine.spark.SparkCommandLineProgram.doWork(SparkCommandLineProgram.java:38)
at org.broadinstitute.hellbender.cmdline.CommandLineProgram.runTool(CommandLineProgram.java:108)
at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMainPostParseArgs(CommandLineProgram.java:166)
at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMain(CommandLineProgram.java:185)
at org.broadinstitute.hellbender.Main.instanceMain(Main.java:76)
at org.broadinstitute.hellbender.Main.main(Main.java:92)

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