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java.util.zip.DataFormatException: invalid stored block lengths	at java.util.zip.Inflater.inflateBytes(Native Method)	at java.util.zip.Inflater.inflate(Inflater.java:238)	at net.sf.samtools.util.BlockGunzipper.unzipBlock(BlockGunzipper.java:96)	at net.sf.samtools.util.BlockCompressedInputStream.inflateBlock(BlockCompressedInputStream.java:379)	at net.sf.samtools.util.BlockCompressedInputStream.readBlock(BlockCompressedInputStream.java:361)	at net.sf.samtools.util.BlockCompressedInputStream.available(BlockCompressedInputStream.java:109)	at net.sf.samtools.util.BlockCompressedInputStream.read(BlockCompressedInputStream.java:234)	at java.io.DataInputStream.read(DataInputStream.java:132)	at net.sf.samtools.util.BinaryCodec.readBytesOrFewer(BinaryCodec.java:394)	at net.sf.samtools.util.BinaryCodec.readBytes(BinaryCodec.java:371)	at net.sf.samtools.util.BinaryCodec.readByteBuffer(BinaryCodec.java:480)	at net.sf.samtools.util.BinaryCodec.readInt(BinaryCodec.java:491)	at net.sf.samtools.BAMRecordCodec.decode(BAMRecordCodec.java:176)	at net.sf.samtools.BAMFileReader$BAMFileIterator.getNextRecord(BAMFileReader.java:519)	at net.sf.samtools.BAMFileReader$BAMFileIndexIterator.getNextRecord(BAMFileReader.java:626)	at net.sf.samtools.BAMFileReader$BAMFileIterator.advance(BAMFileReader.java:493)	at net.sf.samtools.BAMFileReader$BAMFileIterator.next(BAMFileReader.java:483)	at net.sf.samtools.BAMFileReader$BAMFileIterator.next(BAMFileReader.java:449)	at net.sf.samtools.SAMFileReader$AssertableIterator.next(SAMFileReader.java:641)	at net.sf.samtools.SAMFileReader$AssertableIterator.next(SAMFileReader.java:619)	at org.broadinstitute.sting.gatk.iterators.MalformedBAMErrorReformatingIterator.next(MalformedBAMErrorReformatingIterator.java:33)	at org.broadinstitute.sting.gatk.iterators.MalformedBAMErrorReformatingIterator.next(MalformedBAMErrorReformatingIterator.java:14)	at org.broadinstitute.sting.gatk.datasources.reads.SAMDataSource$IntervalOverlapFilteringIterator.advance(SAMDataSource.java:1023)	at org.broadinstitute.sting.gatk.datasources.reads.SAMDataSource$IntervalOverlapFilteringIterator.next(SAMDataSource.java:1004)	at org.broadinstitute.sting.gatk.datasources.reads.SAMDataSource$IntervalOverlapFilteringIterator.next(SAMDataSource.java:936)	at net.sf.picard.util.PeekableIterator.advance(PeekableIterator.java:71)	at net.sf.picard.util.PeekableIterator.next(PeekableIterator.java:57)	at net.sf.picard.sam.MergingSamRecordIterator.next(MergingSamRecordIterator.java:126)	at net.sf.picard.sam.MergingSamRecordIterator.next(MergingSamRecordIterator.java:39)	at org.broadinstitute.sting.gatk.iterators.PrivateStringSAMCloseableIterator.next(StingSAMIteratorAdapter.java:100)	at org.broadinstitute.sting.gatk.iterators.PrivateStringSAMCloseableIterator.next(StingSAMIteratorAdapter.java:84)	at org.broadinstitute.sting.gatk.datasources.reads.SAMDataSource$ReleasingIterator.next(SAMDataSource.java:921)	at org.broadinstitute.sting.gatk.datasources.reads.SAMDataSource$ReleasingIterator.next(SAMDataSource.java:887)	at org.broadinstitute.sting.gatk.filters.CountingFilteringIterator.getNextRecord(CountingFilteringIterator.java:105)	at org.broadinstitute.sting.gatk.filters.CountingFilteringIterator.next(CountingFilteringIterator.java:81)	at org.broadinstitute.sting.gatk.filters.CountingFilteringIterator.next(CountingFilteringIterator.java:41)	at org.broadinstitute.sting.gatk.iterators.PrivateStringSAMCloseableIterator.next(StingSAMIteratorAdapter.java:100)	at org.broadinstitute.sting.gatk.iterators.PrivateStringSAMCloseableIterator.next(StingSAMIteratorAdapter.java:84)	at net.sf.picard.util.PeekableIterator.advance(PeekableIterator.java:71)	at net.sf.picard.util.PeekableIterator.next(PeekableIterator.java:57)	at org.broadinstitute.sting.gatk.iterators.LocusIteratorByState$ReadStateManager.collectPendingReads(LocusIteratorByState.java:627)	at org.broadinstitute.sting.gatk.iterators.LocusIteratorByState.lazyLoadNextAlignmentContext(LocusIteratorByState.java:339)	at org.broadinstitute.sting.gatk.iterators.LocusIteratorByState.hasNext(LocusIteratorByState.java:309)	at net.sf.picard.util.PeekableIterator.advance(PeekableIterator.java:70)	at net.sf.picard.util.PeekableIterator.next(PeekableIterator.java:57)	at org.broadinstitute.sting.gatk.executive.WindowMaker$WindowMakerIterator.advance(WindowMaker.java:156)	at org.broadinstitute.sting.gatk.executive.WindowMaker$WindowMakerIterator.hasNext(WindowMaker.java:125)	at org.broadinstitute.sting.gatk.datasources.providers.LocusView.advance(LocusView.java:151)	at org.broadinstitute.sting.gatk.datasources.providers.LocusView.hasNextLocus(LocusView.java:117)	at org.broadinstitute.sting.gatk.datasources.providers.CoveredLocusView.hasNext(CoveredLocusView.java:32)	at org.broadinstitute.sting.gatk.traversals.TraverseLoci.traverse(TraverseLoci.java:50)	at org.broadinstitute.sting.gatk.traversals.TraverseLoci.traverse(TraverseLoci.java:18)	at org.broadinstitute.sting.gatk.executive.LinearMicroScheduler.execute(LinearMicroScheduler.java:63)	at org.broadinstitute.sting.gatk.GenomeAnalysisEngine.execute(GenomeAnalysisEngine.java:233)	at org.broadinstitute.sting.gatk.CommandLineExecutable.execute(CommandLineExecutable.java:122)	at org.broadinstitute.sting.commandline.CommandLineProgram.start(CommandLineProgram.java:236)	at org.broadinstitute.sting.commandline.CommandLineProgram.start(CommandLineProgram.java:146)	at org.broadinstitute.sting.gatk.CommandLineGATK.main(CommandLineGATK.java:90)