java.io.IOException: Spillfailed        atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.checkSpillException(MapTask.java:1540) atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.collect(MapTask.java:1063)       atorg.apache.hadoop.mapred.MapTask$NewOutputCollector.write(MapTask.java:691)

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    java.io.IOException: Spillfailed        atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.checkSpillException(MapTask.java:1540) atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.collect(MapTask.java:1063)       atorg.apache.hadoop.mapred.MapTask$NewOutputCollector.write(MapTask.java:691)
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    java.io.IOException: Spill failed at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.checkSpillException(MapTas k.java:1535) at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.collect(MapTask.java:1062) at org.apache.hadoop.mapred.MapTask$NewOutputCollector.write(MapTask.java:692) at org.apache.hadoop.mapreduce.task.TaskInputOutputContextImpl.write(TaskInput OutputContextImpl.java:89) at org.apache.hadoop.mapreduce.lib.map.WrappedMapper$Context.write(WrappedMapp er.java:112) at par.gene.align.v3.concordance.ConcordanceMapper.map(ConcordanceMapper.java: 96) at par.gene.align.v3.concordance.ConcordanceMapper.map(ConcordanceMapper.java: 1)
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    gmane.org | 1 year ago
    java.io.IOException: Spill failed at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.checkSpillException(MapTas k.java:1535) at org.apache.hadoop.mapred.MapTask$MapOutputBuffer.collect(MapTask.java:1062) at org.apache.hadoop.mapred.MapTask$NewOutputCollector.write(MapTask.java:692) at org.apache.hadoop.mapreduce.task.TaskInputOutputContextImpl.write(TaskInput OutputContextImpl.java:89) at org.apache.hadoop.mapreduce.lib.map.WrappedMapper$Context.write(WrappedMapp er.java:112) at par.gene.align.v3.concordance.ConcordanceMapper.map(ConcordanceMapper.java: 96) at par.gene.align.v3.concordance.ConcordanceMapper.map(ConcordanceMapper.java: 1)

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    Root Cause Analysis

    1. java.io.IOException

      Spillfailed        atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.checkSpillException(MapTask.java:1540) atorg.apache.hadoop.mapred.MapTask$MapOutputBuffer.collect(MapTask.java:1063)       atorg.apache.hadoop.mapred.MapTask$NewOutputCollector.write(MapTask.java:691)

      at org.apache.hadoop.mapreduce.task.TaskInputOutputContextImpl.write()
    2. Hadoop
      TaskInputOutputContextImpl.write
      1. org.apache.hadoop.mapreduce.task.TaskInputOutputContextImpl.write(TaskInputOutputContextImpl.java:89)
      1 frame