java.lang.IllegalArgumentException: Malformed CIGAR string: 71M12D-1I30M

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via GitHub by JoKw
, 1 year ago
Malformed CIGAR string: 71M12D-1I30M
via GitHub by chapmanb
, 2 years ago
java.lang.IllegalArgumentException: Malformed CIGAR string: 71M12D-1I30M
at htsjdk.samtools.TextCigarCodec.decode(TextCigarCodec.java:69)
at com.astrazeneca.vardict.VarDict.parseSAM(VarDict.java:1550)
at com.astrazeneca.vardict.VarDict.toVars(VarDict.java:2552)
at com.astrazeneca.vardict.VarDict.somaticNotParallel(VarDict.java:353)
at com.astrazeneca.vardict.VarDict.nonAmpVardict(VarDict.java:249)
at com.astrazeneca.vardict.VarDict.start(VarDict.java:65)
at com.astrazeneca.vardict.Main.run(Main.java:134)
at com.astrazeneca.vardict.Main.main(Main.java:25)

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