javax.xml.stream.XMLStreamException: Maximum Element Depth limit (1000) Exceeded

GitHub | matthiaskoenig | 8 months ago
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    javax.xml Maximum Element Depth limit is exceeded for genome-scale models

    GitHub | 8 months ago | matthiaskoenig
    javax.xml.stream.XMLStreamException: Maximum Element Depth limit (1000) Exceeded

    Root Cause Analysis

    1. javax.xml.stream.XMLStreamException

      Maximum Element Depth limit (1000) Exceeded

      at com.ctc.wstx.sr.InputElementStack.push()
    2. Woodstox
      BasicStreamReader.next
      1. com.ctc.wstx.sr.InputElementStack.push(InputElementStack.java:327)
      2. com.ctc.wstx.sr.BasicStreamReader.handleStartElem(BasicStreamReader.java:3020)
      3. com.ctc.wstx.sr.BasicStreamReader.nextFromTree(BasicStreamReader.java:2912)
      4. com.ctc.wstx.sr.BasicStreamReader.next(BasicStreamReader.java:1115)
      4 frames
    3. Stax2 API
      Stax2EventReaderImpl.nextEvent
      1. org.codehaus.stax2.ri.Stax2EventReaderImpl.nextEvent(Stax2EventReaderImpl.java:255)
      1 frame
    4. org.sbml.jsbml
      JSBML.readSBMLFromString
      1. org.sbml.jsbml.xml.stax.SBMLReader.readXMLFromXMLEventReader(SBMLReader.java:568)
      2. org.sbml.jsbml.xml.stax.SBMLReader.readXMLFromStream(SBMLReader.java:533)
      3. org.sbml.jsbml.xml.stax.SBMLReader.readSBMLFromString(SBMLReader.java:834)
      4. org.sbml.jsbml.xml.stax.SBMLReader.readSBMLFromString(SBMLReader.java:848)
      5. org.sbml.jsbml.SBMLReader.readSBMLFromString(SBMLReader.java:267)
      6. org.sbml.jsbml.SBMLReader.read(SBMLReader.java:143)
      7. org.sbml.jsbml.JSBML.readSBMLFromString(JSBML.java:381)
      7 frames