GC overhead limit exceeded

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Stack trace

  • java.lang.OutOfMemoryError: GC overhead limit exceeded at htsjdk.samtools.BinaryTagCodec.readNullTerminatedString( at htsjdk.samtools.BinaryTagCodec.readSingleValue( at htsjdk.samtools.BinaryTagCodec.readTags( at htsjdk.samtools.BAMRecord.decodeAttributes( at htsjdk.samtools.BAMRecord.getAttribute( at htsjdk.samtools.SAMRecord.getReadGroup( at picard.sam.SamToFastq.doWork( at picard.cmdline.CommandLineProgram.instanceMain( at picard.cmdline.PicardCommandLine.instanceMain( at picard.cmdline.PicardCommandLine.main(

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