java.lang.RuntimeException: Database file '/share/PI/euan/apps/bcbio/genomes/Hsapiens/GRCh37/snpeff/GRCh37.75/snpEffectPredic\ tor.bin' is not compatible with this program version: Database version : '4.2' Program version : '4.3' Try installing the appropriate database.

GitHub | lsturm1 | 4 months ago
  1. 0

    svc issue

    GitHub | 4 months ago | lsturm1
    java.lang.RuntimeException: Database file '/share/PI/euan/apps/bcbio/genomes/Hsapiens/GRCh37/snpeff/GRCh37.75/snpEffectPredic\ tor.bin' is not compatible with this program version: Database version : '4.2' Program version : '4.3' Try installing the appropriate database.
  2. 0

    GitHub comment 1225#218845075

    GitHub | 8 months ago | pengxiao78
    java.lang.RuntimeException: Database file '/lustre/user/parallel/bcbio/genomes/Hsapiens/GRCh37/snpeff/GRCh37.75/snpEffectPredictor.bin' is not compatible with this program version: Database version : '4.1' Program version : '4.2' Try installing the appropriate database.
  3. 0
    I did this as root, and works dpkg --add-architecture i386 apt-get install libncurses5:i386 libstdc++6:i386 zlib1g:i386
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    Switch to Android Build Tools 23.0.3
  6. 0
    You might have a JRockit JVM with the management agent started on the same port.

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    Root Cause Analysis

    1. java.lang.RuntimeException

      Database file '/share/PI/euan/apps/bcbio/genomes/Hsapiens/GRCh37/snpeff/GRCh37.75/snpEffectPredic\ tor.bin' is not compatible with this program version: Database version : '4.2' Program version : '4.3' Try installing the appropriate database.

      at org.snpeff.serializer.MarkerSerializer.load()
    2. org.snpeff.serializer
      MarkerSerializer.load
      1. org.snpeff.serializer.MarkerSerializer.load(MarkerSerializer.java:158)
      1 frame
    3. org.snpeff.snpEffect
      Config.loadSnpEffectPredictor
      1. org.snpeff.snpEffect.SnpEffectPredictor.load(SnpEffectPredictor.java:66)
      2. org.snpeff.snpEffect.Config.loadSnpEffectPredictor(Config.java:555)
      2 frames
    4. org.snpeff
      SnpEff.loadDb
      1. org.snpeff.SnpEff.loadDb(SnpEff.java:360)
      1 frame
    5. org.snpeff.snpEffect
      SnpEffCmdEff.run
      1. org.snpeff.snpEffect.commandLine.SnpEffCmdEff.run(SnpEffCmdEff.java:964)
      2. org.snpeff.snpEffect.commandLine.SnpEffCmdEff.run(SnpEffCmdEff.java:947)
      2 frames
    6. org.snpeff
      SnpEff.main
      1. org.snpeff.SnpEff.run(SnpEff.java:1009)
      2. org.snpeff.SnpEff.main(SnpEff.java:155)
      2 frames