java.io.FileNotFoundException: Couldn't find any files matching *.adam

GitHub | jpdna | 5 months ago
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    How to read glob of multiple parquet Genotype

    GitHub | 5 months ago | jpdna
    java.io.FileNotFoundException: Couldn't find any files matching *.adam

    Root Cause Analysis

    1. java.io.FileNotFoundException

      Couldn't find any files matching *.adam

      at org.bdgenomics.adam.rdd.ADAMContext.getFsAndFilesWithFilter()
    2. org.bdgenomics.adam
      ADAMContext.loadParquetAlignments
      1. org.bdgenomics.adam.rdd.ADAMContext.getFsAndFilesWithFilter(ADAMContext.scala:391)
      2. org.bdgenomics.adam.rdd.ADAMContext.loadAvroSequences(ADAMContext.scala:207)
      3. org.bdgenomics.adam.rdd.ADAMContext.loadParquetAlignments(ADAMContext.scala:637)
      3 frames