java.io.FileNotFoundException: /home/bioinfo/zhipengcheng/file/tmp/blockmgr-f7ac149c-fd99-45a3-a917-08317e6d044c/2e/temp_local_2f25d1e2-6f7d-4e88-9344-605da960be39 (no such file or directory)

GitHub | car2008 | 5 months ago
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  1. 0

    GitHub comment 572#249369489

    GitHub | 5 months ago | car2008
    java.io.FileNotFoundException: /home/bioinfo/zhipengcheng/file/tmp/blockmgr-f7ac149c-fd99-45a3-a917-08317e6d044c/2e/temp_local_2f25d1e2-6f7d-4e88-9344-605da960be39 (no such file or directory)
  2. 0

    Spark Executor: Managed memory leak detected

    Stack Overflow | 1 year ago | auxdx
    java.io.FileNotFoundException: /tmp/blockmgr-3acec504-4a55-4aa8-a3e5-dda97ce5d055/03/temp_shuffle_cb37f147-c055-4014-a6ae-fd505cb49f57 (Too many open files)
  3. 0

    What could have caused this error - Java.io.FileNotFoundException: /tmp/spark...?

    Google Groups | 1 year ago | Cuong Tham
    java.io.FileNotFoundException: /tmp/spark-90507c1d-e983-422d-9e01-74ff0a5a2806/executor-360151d5-6b83-4e3e-a0c6-6ddc955cb16c/blockmgr-bca2bde9-212f-4219-af8b-ef0415d60bfa/26/temp_shuffle_98deadd9-f7c3-4a12-9a30-7749f097b5c8 (No such file or directory)
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    Scala Spark FileNotFoundException in windows shared folder

    Stack Overflow | 1 year ago | Paner
    java.io.FileNotFoundException: /media/Ji-share/tmp/blockmgr-2860ab59-1d38-4265-a709-c8372895ace6/13/shuffle_11_49_0.index (Input/output error)
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    How to achieve Hadoop/HDFS Streaming

    codegur.net | 11 months ago
    java.io.FileNotFoundException: /tmp/blockmgr-3acec504-4a55-4aa8-a3e5-dda97ce5d055/03/temp_shuffle_cb37f147-c055-4014-a6ae-fd505cb49f57 (Too many open files)

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Root Cause Analysis

  1. java.io.FileNotFoundException

    /home/bioinfo/zhipengcheng/file/tmp/blockmgr-f7ac149c-fd99-45a3-a917-08317e6d044c/2e/temp_local_2f25d1e2-6f7d-4e88-9344-605da960be39 (no such file or directory)

    at java.io.FileOutputStream.open0()
  2. Java RT
    FileOutputStream.<init>
    1. java.io.FileOutputStream.open0(Native Method)
    2. java.io.FileOutputStream.open(FileOutputStream.java:270)
    3. java.io.FileOutputStream.<init>(FileOutputStream.java:213)
    3 frames
  3. Spark
    Executor$TaskRunner.run
    1. org.apache.spark.storage.DiskBlockObjectWriter.revertPartialWritesAndClose(DiskBlockObjectWriter.scala:162)
    2. org.apache.spark.util.collection.ExternalAppendOnlyMap.spill(ExternalAppendOnlyMap.scala:228)
    3. org.apache.spark.util.collection.ExternalAppendOnlyMap.spill(ExternalAppendOnlyMap.scala:55)
    4. org.apache.spark.util.collection.Spillable$class.maybeSpill(Spillable.scala:93)
    5. org.apache.spark.util.collection.ExternalAppendOnlyMap.maybeSpill(ExternalAppendOnlyMap.scala:55)
    6. org.apache.spark.util.collection.ExternalAppendOnlyMap.insertAll(ExternalAppendOnlyMap.scala:158)
    7. org.apache.spark.Aggregator.combineCombinersByKey(Aggregator.scala:58)
    8. org.apache.spark.shuffle.BlockStoreShuffleReader.read(BlockStoreShuffleReader.scala:83)
    9. org.apache.spark.rdd.ShuffledRDD.compute(ShuffledRDD.scala:98)
    10. org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306)
    11. org.apache.spark.rdd.RDD.iterator(RDD.scala:270)
    12. org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
    13. org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306)
    14. org.apache.spark.rdd.RDD.iterator(RDD.scala:270)
    15. org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
    16. org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306)
    17. org.apache.spark.rdd.RDD.iterator(RDD.scala:270)
    18. org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
    19. org.apache.spark.scheduler.Task.run(Task.scala:89)
    20. org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
    20 frames
  4. Java RT
    Thread.run
    1. java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    2. java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    3. java.lang.Thread.run(Thread.java:745)
    3 frames