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via GitHub by asmirnov239
, 1 year ago
the 'to' index must be between 'from' and the length of the data/position sequence
via GitHub by achevali
, 1 year ago
There must be at least one contig above the threshold length in the sequence dictionary.
java.lang.IllegalArgumentException: the 'to' index must be between 'from' and the length of the data/position sequence at org.broadinstitute.hellbender.utils.Utils.validateArg( at org.broadinstitute.hellbender.utils.param.ParamUtils.inRange( at org.broadinstitute.hellbender.utils.hmm.ForwardBackwardAlgorithm$Result.logProbability( at$calculateLog10GP$6( at$6$1.accept( at java.util.Spliterators$ArraySpliterator.forEachRemaining( at at at at at at at$composeVariantContext$0( at$4$1.accept( at$RangeIntSpliterator.forEachRemaining( at java.util.Spliterator$OfInt.forEachRemaining( at at at$ReduceOp.evaluateSequential( at at at at at at org.broadinstitute.hellbender.cmdline.CommandLineProgram.runTool( at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMainPostParseArgs( at org.broadinstitute.hellbender.cmdline.CommandLineProgram.instanceMain(