htsjdk.samtools.SAMException: Exception creating temporary directory.

GitHub | yhoogstrate | 2 years ago
  1. 0

    GitHub comment 139#105794047

    GitHub | 2 years ago | yhoogstrate
    htsjdk.samtools.SAMException: Exception creating temporary directory.
  2. 0

    Error in installation setup.log

    GitHub | 2 years ago | yurem
    java.io.IOException: Permission denied
  3. 0

    WLST by Examples: WLST Issues

    blogspot.com | 1 year ago
    java.io.IOException: Permission denied
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  5. 0

    GitHub comment 139#105573415

    GitHub | 2 years ago | yhoogstrate
    htsjdk.samtools.SAMException: Exception creating temporary directory.

  1. davidvanlaatum 2 times, last 6 days ago
  2. Vladimir Dmie 1 times, last 4 months ago
  3. davidvanlaatum 5 times, last 6 months ago
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Root Cause Analysis

  1. java.io.IOException

    Permission denied

    at java.io.UnixFileSystem.createFileExclusively()
  2. Java RT
    File.createTempFile
    1. java.io.UnixFileSystem.createFileExclusively(Native Method)
    2. java.io.File.createNewFile(File.java:1006)
    3. java.io.File.createTempFile(File.java:1989)
    4. java.io.File.createTempFile(File.java:2040)
    4 frames
  3. HTS JDK
    IOUtil.createTempDir
    1. htsjdk.samtools.util.IOUtil.createTempDir(IOUtil.java:668)
    1 frame