java.lang.OutOfMemoryError: GC overhead limit exceeded

Google Groups | Ilya Flyamer | 8 months ago
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  1. 0

    CLT pre problem

    Google Groups | 8 months ago | Ilya Flyamer
    java.lang.OutOfMemoryError: GC overhead limit exceeded
  2. 0

    java.lang.OutOfMemoryError: Java heap space in Eclipse, regardless of the settings

    Stack Overflow | 2 years ago | Eugenio
    java.lang.OutOfMemoryError: Java heap space
  3. 0

    GC overhead limit exceeded

    GitHub | 1 year ago | samek
    java.lang.OutOfMemoryError: GC overhead limit exceeded
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    Root Cause Analysis

    1. java.lang.OutOfMemoryError

      GC overhead limit exceeded

      at java.lang.String.substring()
    2. Java RT
      String.subSequence
      1. java.lang.String.substring(String.java:1913)
      2. java.lang.String.subSequence(String.java:1946)
      2 frames
    3. Guava
      Splitter.splitToList
      1. com.google.common.base.Splitter$SplittingIterator.computeNext(Splitter.java:612)
      2. com.google.common.base.Splitter$SplittingIterator.computeNext(Splitter.java:522)
      3. com.google.common.base.AbstractIterator.tryToComputeNext(AbstractIterator.java:64)
      4. com.google.common.base.AbstractIterator.hasNext(AbstractIterator.java:59)
      5. com.google.common.base.Splitter.splitToList(Splitter.java:421)
      5 frames
    4. juicebox.tools.utils
      Preprocessor.preprocess
      1. juicebox.tools.utils.original.AsciiPairIterator.advance(AsciiPairIterator.java:90)
      2. juicebox.tools.utils.original.AsciiPairIterator.next(AsciiPairIterator.java:184)
      3. juicebox.tools.utils.original.Preprocessor.writeBody(Preprocessor.java:320)
      4. juicebox.tools.utils.original.Preprocessor.preprocess(Preprocessor.java:216)
      4 frames
    5. juicebox.tools.clt
      PreProcessing.run
      1. juicebox.tools.clt.old.PreProcessing.run(PreProcessing.java:94)
      1 frame
    6. juicebox.tools
      HiCTools.main
      1. juicebox.tools.HiCTools.main(HiCTools.java:79)
      1 frame