java.lang.IndexOutOfBoundsException: Number of sites and genotypes do not agree

Google Groups | Marlee Labroo | 4 months ago
  1. 0

    error: number of sites and genotypes do not agree

    Google Groups | 4 months ago | Marlee Labroo
    java.lang.IndexOutOfBoundsException: Number of sites and genotypes do not agree
  2. 0

    Debug Lucene testContainsWithMultipleValues failure

    GitHub | 2 years ago | dalaro
    java.lang.IndexOutOfBoundsException: position (0) must be less than the number of elements that remained (0)
  3. 0

    Inspired by Actual Events: Guava Preconditions Class

    blogspot.com | 4 months ago
    java.lang.IndexOutOfBoundsException: String array index number (3) must not be greater than size (2)
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  5. 0

    Guava Preconditions Class

    javacodegeeks.com | 11 months ago
    java.lang.IndexOutOfBoundsException: String array index number (3) must not be greater than size (2)
  6. 0

    Inspired by Actual Events: October 2011

    blogspot.com | 8 months ago
    java.lang.IndexOutOfBoundsException: String array index number (3) must not be greater than size (2)

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    Root Cause Analysis

    1. java.lang.IndexOutOfBoundsException

      Number of sites and genotypes do not agree

      at net.maizegenetics.dna.snp.GenotypeTableBuilder.addTaxon()
    2. net.maizegenetics.dna
      GenotypeTableBuilder.addTaxon
      1. net.maizegenetics.dna.snp.GenotypeTableBuilder.addTaxon(GenotypeTableBuilder.java:569)
      1 frame
    3. net.maizegenetics.analysis
      ProductionSNPCallerPluginV2.lambda$processData$105
      1. net.maizegenetics.analysis.gbs.v2.ProductionSNPCallerPluginV2.callGenotypes(ProductionSNPCallerPluginV2.java:294)
      2. net.maizegenetics.analysis.gbs.v2.ProductionSNPCallerPluginV2.lambda$processData$105(ProductionSNPCallerPluginV2.java:264)
      2 frames
    4. Java RT
      ReferencePipeline$Head.forEach
      1. java.util.Iterator.forEachRemaining(Unknown Source)
      2. java.util.Spliterators$IteratorSpliterator.forEachRemaining(Unknown Source)
      3. java.util.stream.ReferencePipeline$Head.forEach(Unknown Source)
      3 frames
    5. net.maizegenetics.analysis
      ProductionSNPCallerPluginV2.processData
      1. net.maizegenetics.analysis.gbs.v2.ProductionSNPCallerPluginV2.processData(ProductionSNPCallerPluginV2.java:263)
      1 frame
    6. net.maizegenetics.plugindef
      ThreadedPluginListener.run
      1. net.maizegenetics.plugindef.AbstractPlugin.performFunction(AbstractPlugin.java:110)
      2. net.maizegenetics.plugindef.AbstractPlugin.dataSetReturned(AbstractPlugin.java:1645)
      3. net.maizegenetics.plugindef.ThreadedPluginListener.run(ThreadedPluginListener.java:29)
      3 frames
    7. Java RT
      Thread.run
      1. java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
      2. java.util.concurrent.FutureTask.run(Unknown Source)
      3. java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
      4. java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
      5. java.lang.Thread.run(Unknown Source)[pool-1-thread-1]
      5 frames