org.bdgenomics.formats.avro.Genotype: This exception has no message.

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via Google Groups by someya sayeh, 1 year ago
This exception has no message.
org.bdgenomics.formats.avro.Genotype:
at org.bdgenomics.adam.rdd.variation.GenotypeRDDFunctions$$anonfun$10.apply(VariationRDDFunctions.scala:153)
at org.apache.spark.rdd.RDD$$anonfun$keyBy$1.apply(RDD.scala:1324)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:328)
at org.apache.spark.util.collection.ExternalSorter.spillToPartitionFiles(ExternalSorter.scala:371)
at org.apache.spark.util.collection.ExternalSorter.insertAll(ExternalSorter.scala:211)
at org.apache.spark.shuffle.sort.SortShuffleWriter.write(SortShuffleWriter.scala:63)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:68)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:41)
at org.apache.spark.scheduler.Task.run(Task.scala:64)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)

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