htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0: >

Google Groups | Sergei Iakhnin | 1 year ago
  1. 0

    Exception converting VCF to ADAM

    Google Groups | 1 year ago | Sergei Iakhnin
    htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0: >
  2. 0

    Exception converting VCF to ADAM

    Google Groups | 1 year ago | Sergei Iakhnin
    htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0:
  3. 0

    Exception converting VCF to ADAM

    Google Groups | 1 year ago | Sergei Iakhnin
    htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0:
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  5. 0

    Importing directory of VCFs seems to fail

    GitHub | 12 months ago | fnothaft
    htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0:
  6. 0

    ./gatk-launch CountVariantsSpark --variant not reading gz vcf

    GitHub | 7 months ago | tushu1232
    htsjdk.tribble.TribbleException: Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0:

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    Root Cause Analysis

    1. htsjdk.tribble.TribbleException

      Input stream does not contain a BCF encoded file; BCF magic header info not found, at record 0 with position 0: >

      at htsjdk.variant.bcf2.BCF2Codec.error()
    2. HTS JDK
      BCF2Codec.error
      1. htsjdk.variant.bcf2.BCF2Codec.error(BCF2Codec.java:492)
      1 frame