java.lang.ArrayIndexOutOfBoundsException: 20

Google Groups | Timothy Wolff-Piggott | 5 months ago
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    Phylogeographic GLM predictor error in BEAST 1.8.3

    Google Groups | 5 months ago | Timothy Wolff-Piggott
    java.lang.ArrayIndexOutOfBoundsException: 20

    Root Cause Analysis

    1. java.lang.ArrayIndexOutOfBoundsException

      20

      at dr.math.matrixAlgebra.RobustEigenDecomposition.tql2()
    2. dr.math.matrixAlgebra
      RobustEigenDecomposition.<init>
      1. dr.math.matrixAlgebra.RobustEigenDecomposition.tql2(Unknown Source)
      2. dr.math.matrixAlgebra.RobustEigenDecomposition.<init>(Unknown Source)
      2 frames
    3. dr.app.beagle
      AbstractTreeLikelihood.getLogLikelihood
      1. dr.app.beagle.evomodel.substmodel.ColtEigenSystem.decomposeMatrix(Unknown Source)
      2. dr.app.beagle.evomodel.substmodel.BaseSubstitutionModel.decompose(Unknown Source)
      3. dr.app.beagle.evomodel.substmodel.BaseSubstitutionModel.getEigenDecomposition(Unknown Source)
      4. dr.app.beagle.evomodel.treelikelihood.SubstitutionModelDelegate.updateSubstitutionModels(Unknown Source)
      5. dr.app.beagle.evomodel.treelikelihood.BeagleTreeLikelihood.calculateLogLikelihood(Unknown Source)
      6. dr.app.beagle.evomodel.treelikelihood.AncestralStateBeagleTreeLikelihood.calculateLogLikelihood(Unknown Source)
      7. dr.app.beagle.evomodel.treelikelihood.AbstractTreeLikelihood.getLogLikelihood(Unknown Source)
      7 frames
    4. dr.inference.model
      CompoundLikelihood.getDiagnosis
      1. dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
      2. dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
      3. dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
      3 frames
    5. dr.inference.markovchain
      MarkovChain.runChain
      1. dr.inference.markovchain.MarkovChain.runChain(Unknown Source)
      1 frame
    6. dr.inference.mcmc
      MCMC.run
      1. dr.inference.mcmc.MCMC.chain(Unknown Source)
      2. dr.inference.mcmc.MCMC.run(Unknown Source)
      2 frames
    7. Java RT
      Thread.run
      1. java.lang.Thread.run(Unknown Source)
      1 frame