java.lang.ArrayIndexOutOfBoundsException: 20

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via Google Groups by Timothy Wolff-Piggott, 1 year ago
java.lang.ArrayIndexOutOfBoundsException: 20
at dr.math.matrixAlgebra.RobustEigenDecomposition.tql2(Unknown Source)
at dr.math.matrixAlgebra.RobustEigenDecomposition.(Unknown Source)
at dr.app.beagle.evomodel.substmodel.ColtEigenSystem.decomposeMatrix(Unknown Source)
at dr.app.beagle.evomodel.substmodel.BaseSubstitutionModel.decompose(Unknown Source)
at dr.app.beagle.evomodel.substmodel.BaseSubstitutionModel.getEigenDecomposition(Unknown Source)
at dr.app.beagle.evomodel.treelikelihood.SubstitutionModelDelegate.updateSubstitutionModels(Unknown Source)
at dr.app.beagle.evomodel.treelikelihood.BeagleTreeLikelihood.calculateLogLikelihood(Unknown Source)
at dr.app.beagle.evomodel.treelikelihood.AncestralStateBeagleTreeLikelihood.calculateLogLikelihood(Unknown Source)
at dr.app.beagle.evomodel.treelikelihood.AbstractTreeLikelihood.getLogLikelihood(Unknown Source)
at dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
at dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
at dr.inference.model.CompoundLikelihood.getDiagnosis(Unknown Source)
at dr.inference.markovchain.MarkovChain.runChain(Unknown Source)
at dr.inference.mcmc.MCMC.chain(Unknown Source)
at dr.inference.mcmc.MCMC.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)

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