com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3 ; bad SQL grammar []; nested exception is com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3] with root cause com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3

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", "mutation"."MUTATION_STATUS" as "mutati' at line 3] with root cause com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3
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com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3 ; bad SQL grammar []; nested exception is com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3] with root cause com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '."CENTER" as "sequencingCenter", "mutation"."MUTATION_STATUS" as "mutati' at line 3
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:411)
at com.mysql.jdbc.Util.getInstance(Util.java:386)
at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1052)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3597)
at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3529)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1990)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2151)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2625)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:2119)
at com.mysql.jdbc.PreparedStatement.execute(PreparedStatement.java:1362)
at org.apache.tomcat.dbcp.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.java:172)
at org.apache.tomcat.dbcp.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.java:172)
at org.apache.ibatis.executor.statement.PreparedStatementHandler.query(PreparedStatementHandler.java:59)
at org.apache.ibatis.executor.statement.RoutingStatementHandler.query(RoutingStatementHandler.java:73)
at org.apache.ibatis.executor.SimpleExecutor.doQuery(SimpleExecutor.java:60)
at org.apache.ibatis.executor.BaseExecutor.queryFromDatabase(BaseExecutor.java:267)
at org.apache.ibatis.executor.BaseExecutor.query(BaseExecutor.java:137)
at org.apache.ibatis.executor.CachingExecutor.query(CachingExecutor.java:90)
at org.apache.ibatis.executor.CachingExecutor.query(CachingExecutor.java:77)
at org.apache.ibatis.session.defaults.DefaultSqlSession.selectList(DefaultSqlSession.java:108)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.sun.proxy.$Proxy206.selectList(Unknown Source)
at org.mybatis.spring.SqlSessionTemplate.selectList(SqlSessionTemplate.java:198)
at org.apache.ibatis.binding.MapperMethod.executeForMany(MapperMethod.java:119)
at org.apache.ibatis.binding.MapperMethod.execute(MapperMethod.java:63)
at com.sun.proxy.$Proxy213.getMutations(Unknown Source)
at org.cbioportal.persistence.mybatis.MutationMyBatisRepository.getMutations(MutationMyBatisRepository.java:19)
at org.cbioportal.service.impl.MutationServiceImpl.getMutations(MutationServiceImpl.java:20)
at org.mskcc.cbio.portal.service.ApiService.getGeneticProfileData(ApiService.java:363)
at org.mskcc.cbio.portal.service.ApiService$$FastClassBySpringCGLIB$$e4cf2f40.invoke()
at org.springframework.aop.framework.CglibAopProxy$CglibMethodInvocation.invokeJoinpoint(CglibAopProxy.java:708)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:98)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:262)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.mskcc.cbio.portal.service.ApiService$$EnhancerBySpringCGLIB$$426659a7.getGeneticProfileData()
at org.mskcc.cbio.portal.web.api.ApiController.getGeneticProfileData(ApiController.java:314)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.springframework.web.method.support.InvocableHandlerMethod.invoke(InvocableHandlerMethod.java:215)
at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:104)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandleMethod(RequestMappingHandlerAdapter.java:749)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:689)
at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:83)
at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:938)
at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:870)
at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:961)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:647)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:728)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:305)
at org.mskcc.cbio.portal.util.XssFilter.doFilter(XssFilter.java:65)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:186)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:344)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at org.apache.catalina.filters.CorsFilter.handleSimpleCORS(CorsFilter.java:302)
at org.apache.catalina.filters.CorsFilter.doFilter(CorsFilter.java:170)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:222)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:123)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:502)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:171)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:99)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:953)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
at org.apache.coyote.ajp.AjpProcessor.process(AjpProcessor.java:200)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:589)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)

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