java.lang.IllegalArgumentException: Reference index 322 not found in sequence dictionary.

Google Groups | Миша Роткевич | 9 months ago
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    Qualimap report for a specific chromosomes

    Google Groups | 9 months ago | Миша Роткевич
    java.lang.IllegalArgumentException: Reference index 322 not found in sequence dictionary.

    Root Cause Analysis

    1. java.lang.NullPointerException

      No message provided

      at net.sf.samtools.SAMRecord.setReferenceIndex()
    2. picard
      SAMRecord.setReferenceIndex
      1. net.sf.samtools.SAMRecord.setReferenceIndex(SAMRecord.java:364)
      1 frame