java.lang.IllegalStateException: Command line failed with exit code: 134 Command: bin/hmmer/hmmer3/hmmsearch -Z 4023 --cut_tc data/tigrfam/13.0/TIGRFAMs_13.0_HMM.LIB temp/node16.cluster2.keygene.local_20130424_092824227_69cx/jobTIGRFAM-13.0/000000029501_000000029600.fasta Error output from binary: Fatal exception (source file esl_threads.c, line 129): thread creation failed

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via Google Groups by Unknown author, 1 year ago
Command line failed with exit code: 134 Command: bin/hmmer/hmmer3/hmmsearch -Z 4023 --cut_tc data/tigrfam/13.0/TIGRFAMs_13.0_HMM.LIB temp/node16.cluster2.keygene.local_20130424_092824227_69cx/jobTIGRFAM-13.0/000000029501_000000029600.fasta Error output from binary: Fatal exception (source file esl_threads.c, line 129): thread creation failed
via Google Groups by Josef Schmitz, 1 year ago
Command line failed with exit code: 141 Command: bin/ps_scan.pl -d data/prosite/20.66/prosite.dat --pfscan bin/ pfscan -s -m -o gff temp/dell- node-4.mpipz.mpg.de_20120515_120040054_154q/jobPrositeProfiles/ 000000000001_000000000001.fasta Error
via GitHub by dlepp
, 1 year ago
Command line failed with exit code: 255 Command: perl -I bin/panther/pantherScore/1.04/lib bin/panther/pantherScore/1.04/pantherScore.pl -l /media/4tb1/Users/leppd/Shared/Panther -D I -E 1e-3 -n -c 1 -B bin/blast/2.2.24/bin/blastall -H bin/hmmer
via GitHub by diecasfranco
, 2 days ago
Command line failed with exit code: 127 Command: /home/dfranco/interproscan/interproscan-5.25-64.0/bin/blast/ncbi-blast-2.6.0+/rpsblast -query /home/dfranco/analise_metagenoma/anvio_results/HR4/temp/seal_20171004_104055397_hqhj//jobCDD
via GitHub by bastian-wur
, 2 days ago
/annotationHKF5JBBXX_103099-001-025//temp/weaselshark_20171005_115510659_fx2d//jobCDD/000000002001_000000003000.fasta -db data/cdd/3.16/db/Cdd_NCBI -evalue 0.01 -seg no -outfmt 5 Error output from binary: bin/blast/ncbi-blast-2.6.0+/rpsblast: error while loading shared libraries: libgnutls.so.28: cannot open shared object file: No such file or directory
via GitHub by ijulca
, 2 days ago
Command line failed with exit code: 139 Command: bin/sfld/sfld_postprocess -s data/sfld/2/sfld_sites.annot -a /home/tmp/titan_20170530_094020591_evo//jobSFLD/000000000002_000000000091.raw.align.out -O /home/tmp/titan_20170530_094020591_evo//jobSFLD
java.lang.IllegalStateException: Command line failed with exit code: 134 Command: bin/hmmer/hmmer3/hmmsearch -Z 4023 --cut_tc data/tigrfam/13.0/TIGRFAMs_13.0_HMM.LIB temp/node16.cluster2.keygene.local_20130424_092824227_69cx/jobTIGRFAM-13.0/000000029501_000000029600.fasta Error output from binary: Fatal exception (source file esl_threads.c, line 129): thread creation failed
at uk.ac.ebi.interpro.scan.management.model.implementations.RunBinaryStep.execute(RunBinaryStep.java:126)
at uk.ac.ebi.interpro.scan.jms.activemq.StepExecutionTransactionImpl.executeInTransaction(StepExecutionTransactionImpl.java:84)
at sun.reflect.GeneratedMethodAccessor66.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:319)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at undefined.$Proxy94.executeInTransaction(Unknown Source)
at uk.ac.ebi.interpro.scan.jms.activemq.WorkerListener.onMessage(WorkerListener.java:102)
at org.springframework.jms.listener.AbstractMessageListenerContainer.doInvokeListener(AbstractMessageListenerContainer.java:562)
at org.springframework.jms.listener.AbstractMessageListenerContainer.invokeListener(AbstractMessageListenerContainer.java:500)
at org.springframework.jms.listener.AbstractMessageListenerContainer.doExecuteListener(AbstractMessageListenerContainer.java:468)
at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.doReceiveAndExecute(AbstractPollingMessageListenerContainer.java:326)
at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.receiveAndExecute(AbstractPollingMessageListenerContainer.java:264)
at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.invokeListener(DefaultMessageListenerContainer.java:1071)
at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.executeOngoingLoop(DefaultMessageListenerContainer.java:1063)
at java.lang.Thread.run(Thread.java:662)

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