org.broad.igv.exceptions.DataLoadException

An error occurred while accessing: S:\Bioinformatics\analysis\lmw\hox_in_lamprey\pmg1.d2\aa_igv_session.xml<br>Fasta file has uneven line lengths in contig null

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Solutions on the web10

  • An error occurred while accessing: S:\Bioinformatics\analysis\lmw\hox_in_lamprey\pmg1.d2\aa_igv_session.xml<br>Fasta file has uneven line lengths in contig null
  • via Google Groups by Sepideh Alamouti, 1 year ago
    An error occurred while accessing: /Volumes/morinlab/projects/capp_seq_forme_fruste/help/refgenefusion_pog062_S17.PSort.rmdup.bam<br>Fasta file has uneven line lengths in contig null
  • via Google Groups by Peio Ziarsolo, 1 year ago
    <html>An error occurred while accessing: /home/jope/work_in/igv_bug/snvs_to_igv.vcf<br>null
  • Stack trace

    • org.broad.igv.exceptions.DataLoadException: An error occurred while accessing: S:\Bioinformatics\analysis\lmw\hox_in_lamprey\pmg1.d2\aa_igv_session.xml<br>Fasta file has uneven line lengths in contig null at org.broad.igv.feature.genome.FastaUtils.createIndexFile(FastaUtils.java:94) at org.broad.igv.feature.genome.GenomeManager.loadFastaFile(GenomeManager.java:290) at org.broad.igv.feature.genome.GenomeManager.loadGenome(GenomeManager.java:167) at org.broad.igv.ui.IGV.loadGenome(IGV.java:699) at org.broad.igv.ui.IGV.loadGenome(IGV.java:680) at org.broad.igv.session.IGVSessionReader.processRootNode(IGVSessionReader.java:404) at org.broad.igv.session.IGVSessionReader.loadSession(IGVSessionReader.java:324) at org.broad.igv.ui.IGV.restoreSessionSynchronous(IGV.java:1484) at org.broad.igv.ui.IGV$10.run(IGV.java:1453) at org.broad.igv.util.LongRunningTask.call(LongRunningTask.java:72) at java.util.concurrent.FutureTask.run(Unknown Source) at java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) at java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) at java.lang.Thread.run(Unknown Source)

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