org.rosuda.REngine.Rserve.RserveException: Cannot connect: Connection refused

GitHub | pdurbin | 3 months ago
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    GitHub | 1 year ago | kcondon
    org.rosuda.REngine.Rserve.RserveException: voidEval failed, request status: error code: 127
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    GitHub | 2 years ago | kcondon
    org.rosuda.REngine.Rserve.RserveException: voidEval failed, request status: error code: 127
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    Google Groups | 5 years ago | Sukhdev Singh
    org.rosuda.REngine.Rserve.RserveException: voidEval failed, request status: error code: 127

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    Root Cause Analysis

    1. org.rosuda.REngine.Rserve.RserveException

      Cannot connect: Connection refused

      at org.rosuda.REngine.Rserve.RConnection.<init>()
    2. org.rosuda.REngine
      RConnection.<init>
      1. org.rosuda.REngine.Rserve.RConnection.<init>(RConnection.java:88)
      2. org.rosuda.REngine.Rserve.RConnection.<init>(RConnection.java:60)
      2 frames
    3. edu.harvard.iq
      DownloadInstanceWriter.writeTo
      1. edu.harvard.iq.dataverse.rserve.RemoteDataFrameService.runDataPreprocessing(RemoteDataFrameService.java:556)
      2. edu.harvard.iq.dataverse.dataaccess.DataFileConverter.runFormatConversion(DataFileConverter.java:257)
      3. edu.harvard.iq.dataverse.dataaccess.DataFileConverter.performFormatConversion(DataFileConverter.java:120)
      4. edu.harvard.iq.dataverse.api.DownloadInstanceWriter.writeTo(DownloadInstanceWriter.java:109)
      5. edu.harvard.iq.dataverse.api.DownloadInstanceWriter.writeTo(DownloadInstanceWriter.java:40)
      5 frames
    4. Jersey Core
      WriterInterceptorExecutor.proceed
      1. org.glassfish.jersey.message.internal.WriterInterceptorExecutor$TerminalWriterInterceptor.invokeWriteTo(WriterInterceptorExecutor.java:263)
      2. org.glassfish.jersey.message.internal.WriterInterceptorExecutor$TerminalWriterInterceptor.aroundWriteTo(WriterInterceptorExecutor.java:250)
      3. org.glassfish.jersey.message.internal.WriterInterceptorExecutor.proceed(WriterInterceptorExecutor.java:162)
      3 frames
    5. jersey-core-server
      JsonWithPaddingInterceptor.aroundWriteTo
      1. org.glassfish.jersey.server.internal.JsonWithPaddingInterceptor.aroundWriteTo(JsonWithPaddingInterceptor.java:106)
      1 frame
    6. Jersey Core
      WriterInterceptorExecutor.proceed
      1. org.glassfish.jersey.message.internal.WriterInterceptorExecutor.proceed(WriterInterceptorExecutor.java:162)
      1 frame
    7. jersey-core-server
      MappableExceptionWrapperInterceptor.aroundWriteTo
      1. org.glassfish.jersey.server.internal.MappableExceptionWrapperInterceptor.aroundWriteTo(MappableExceptionWrapperInterceptor.java:89)
      1 frame
    8. Jersey Core
      MessageBodyFactory.writeTo
      1. org.glassfish.jersey.message.internal.WriterInterceptorExecutor.proceed(WriterInterceptorExecutor.java:162)
      2. org.glassfish.jersey.message.internal.MessageBodyFactory.writeTo(MessageBodyFactory.java:1154)
      2 frames
    9. jersey-core-server
      ServerRuntime$1.run
      1. org.glassfish.jersey.server.ServerRuntime$Responder.writeResponse(ServerRuntime.java:621)
      2. org.glassfish.jersey.server.ServerRuntime$Responder.processResponse(ServerRuntime.java:377)
      3. org.glassfish.jersey.server.ServerRuntime$Responder.process(ServerRuntime.java:367)
      4. org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:274)
      4 frames
    10. Jersey Core
      RequestScope.runInScope
      1. org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
      2. org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
      3. org.glassfish.jersey.internal.Errors.process(Errors.java:315)
      4. org.glassfish.jersey.internal.Errors.process(Errors.java:297)
      5. org.glassfish.jersey.internal.Errors.process(Errors.java:267)
      6. org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:297)
      6 frames
    11. jersey-core-server
      ApplicationHandler.handle
      1. org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:254)
      2. org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:1028)
      2 frames
    12. jersey-container-servlet-core
      ServletContainer.service
      1. org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:372)
      2. org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:381)
      3. org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:344)
      4. org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:221)
      4 frames
    13. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1682)
      2. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:344)
      3. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
      3 frames
    14. org.ocpsoft.rewrite
      RewriteFilter.doFilter
      1. org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:205)
      1 frame
    15. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
      2 frames
    16. edu.harvard.iq
      ApiBlockingFilter.doFilter
      1. edu.harvard.iq.dataverse.api.ApiBlockingFilter.doFilter(ApiBlockingFilter.java:162)
      1 frame
    17. Glassfish Core
      ApplicationFilterChain.doFilter
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
      2 frames
    18. edu.harvard.iq
      ApiRouter.doFilter
      1. edu.harvard.iq.dataverse.api.ApiRouter.doFilter(ApiRouter.java:30)
      1 frame
    19. Glassfish Core
      ApplicationDispatcher.forward
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
      3. org.apache.catalina.core.ApplicationDispatcher.doInvoke(ApplicationDispatcher.java:873)
      4. org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:739)
      5. org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:575)
      6. org.apache.catalina.core.ApplicationDispatcher.doDispatch(ApplicationDispatcher.java:546)
      7. org.apache.catalina.core.ApplicationDispatcher.dispatch(ApplicationDispatcher.java:428)
      8. org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:378)
      8 frames
    20. edu.harvard.iq
      ApiRouter.doFilter
      1. edu.harvard.iq.dataverse.api.ApiRouter.doFilter(ApiRouter.java:34)
      1 frame
    21. Glassfish Core
      StandardPipeline.invoke
      1. org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
      2. org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
      3. org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:316)
      4. org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:160)
      5. org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:734)
      6. org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:673)
      6 frames
    22. Glassfish
      WebPipeline.invoke
      1. com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:99)
      1 frame
    23. Glassfish Core
      CoyoteAdapter.service
      1. org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:174)
      2. org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:415)
      3. org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:282)
      3 frames
    24. Kernel Classes
      ContainerMapper.service
      1. com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:459)
      2. com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:167)
      2 frames
    25. Grizzly Server
      HttpServerFilter.handleRead
      1. org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:201)
      2. org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:175)
      3. org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
      3 frames
    26. Grizzly
      AbstractThreadPool$Worker.run
      1. org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
      2. org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
      3. org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
      4. org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
      5. org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
      6. org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
      7. org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:561)
      8. org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
      9. org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
      10. org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
      11. org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
      12. org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:565)
      13. org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:545)
      13 frames
    27. Java RT
      Thread.run
      1. java.lang.Thread.run(Thread.java:745)
      1 frame