org.apache.spark.SparkException

Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype


Solutions on the web2309

Solution icon of github
via GitHub by heuermh
, 7 months ago
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype

Solution icon of apache
via Apache's JIRA Issue Tracker by Aditya Parmar, 1 year ago
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayIndexOutOfBoundsException: 1

Solution icon of web
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayIndexOutOfBoundsException: 1

Solution icon of apache
via Apache's JIRA Issue Tracker by Aditya Parmar, 1 year ago
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayIndexOutOfBoundsException: 1

Solution icon of stackoverflow
Job aborted due to stage failure: Task 0 in stage 28.0 failed 1 times, most recent failure: Lost task 0.0 in stage 28.0 (TID 46, localhost): java.lang.ArrayStoreException: scala.collection.mutable.MutableList

Solution icon of web
via nabble.com by Unknown author, 1 year ago
Job aborted due to stage failure: Task 0 in stage 37.0 failed 1 times, most recent failure: Lost task 0.0 in stage 37.0 (TID 73, localhost): java.lang.ArrayStoreException: org.apache.spark.sql.catalyst.expressions.GenericRowWithSchema

Solution icon of github
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.NullPointerException

Solution icon of stackoverflow
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.NullPointerException

Solution icon of stackoverflow
via Stack Overflow by LearningSlowly
, 11 months ago
Job aborted due to stage failure: Task 0 in stage 15.0 failed 1 times, most recent failure: Lost task 0.0 in stage 15.0 (TID 13, localhost): java.lang.ArrayStoreException: java.lang.Long

Solution icon of stackoverflow
via Stack Overflow by DaliMidou
, 5 months ago
Job aborted due to stage failure: Task 0 in stage 28.0 failed 1 times, most recent failure: Lost task 0.0 in stage 28.0 (TID 46, localhost): java.lang.ArrayStoreException: scala.collection.mutable.MutableList

Stack trace

  • org.apache.spark.SparkException: Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype at scala.runtime.ScalaRunTime$.array_update(ScalaRunTime.scala:88) at scala.Array$.slowcopy(Array.scala:81) at scala.Array$.copy(Array.scala:107) at scala.collection.mutable.ResizableArray$class.copyToArray(ResizableArray.scala:77) at scala.collection.mutable.ArrayBuffer.copyToArray(ArrayBuffer.scala:47) at scala.collection.TraversableOnce$class.copyToArray(TraversableOnce.scala:241) at scala.collection.AbstractTraversable.copyToArray(Traversable.scala:105) at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:249) at scala.collection.AbstractTraversable.toArray(Traversable.scala:105) at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:252) at scala.collection.AbstractIterator.toArray(Iterator.scala:1157) at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:927) at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:927) at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858) at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858) at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66) at org.apache.spark.scheduler.Task.run(Task.scala:89) at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:227) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745)

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