org.apache.spark.SparkException: Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype

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via GitHub by heuermh
, 11 months ago
Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype
via nabble.com by Unknown author, 1 year ago
Job aborted due to stage failure: Task 0 in stage 37.0 failed 1 times, most recent failure: Lost task 0.0 in stage 37.0 (TID 73, localhost): java.lang.ArrayStoreException: org.apache.spark.sql.catalyst.expressions.GenericRowWithSchema
via Google Groups by Unknown author, 11 months ago
Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3, cluster-3-w-0.c.abc-def-00-0000.internal): java.lang.ArrayStoreException: org.apache.avro.generic.GenericData$Record
via github.com by Unknown author, 1 year ago
Job aborted due to stage failure: Task 0 in stage 1.0 failed 1 times, most recent failure: Lost task 0.0 in stage 1.0 (TID 3, localhost): java.lang.ArrayStoreException: org.apache.avro.generic.GenericData$Record
via databricks.com by Unknown author, 2 years ago
Job aborted due to stage failure: Task 0 in stage 2657.0 failed 4 times, most recent failure: Lost task 0.3 in stage 2657.0 (TID 800, 10.0.193.24): java.lang.ArrayStoreException: scala.Tuple2
via Stack Overflow by LearningSlowly
, 1 year ago
Job aborted due to stage failure: Task 0 in stage 15.0 failed 1 times, most recent failure: Lost task 0.0 in stage 15.0 (TID 13, localhost): java.lang.ArrayStoreException: java.lang.Long
org.apache.spark.SparkException: Job aborted due to stage failure: Task 1 in stage 0.0 failed 1 times, most recent failure: Lost task 1.0 in stage 0.0 (TID 1, localhost): java.lang.ArrayStoreException: org.bdgenomics.formats.avro.Genotype
at scala.runtime.ScalaRunTime$.array_update(ScalaRunTime.scala:88)
at scala.Array$.slowcopy(Array.scala:81)
at scala.Array$.copy(Array.scala:107)
at scala.collection.mutable.ResizableArray$class.copyToArray(ResizableArray.scala:77)
at scala.collection.mutable.ArrayBuffer.copyToArray(ArrayBuffer.scala:47)
at scala.collection.TraversableOnce$class.copyToArray(TraversableOnce.scala:241)
at scala.collection.AbstractTraversable.copyToArray(Traversable.scala:105)
at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:249)
at scala.collection.AbstractTraversable.toArray(Traversable.scala:105)
at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:252)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:927)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$12.apply(RDD.scala:927)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:1858)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
at org.apache.spark.scheduler.Task.run(Task.scala:89)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)

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