com.github.mustachejava.MustacheException: Error invoking method eppic.assembly.gui.LatticeGUIMustache.getGraph2D() on eppic.assembly.gui.LatticeGUIMustache@2082545616 @[mustache/eppic/assembly/gui/AssemblyDiagramThumb.dot.mustache:25]

GitHub | josemduarte | 1 month ago
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    GitHub | 1 month ago | josemduarte
    com.github.mustachejava.MustacheException: Error invoking method eppic.assembly.gui.LatticeGUIMustache.getGraph2D() on eppic.assembly.gui.LatticeGUIMustache@2082545616 @[mustache/eppic/assembly/gui/AssemblyDiagramThumb.dot.mustache:25]
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Root Cause Analysis

  1. java.lang.IndexOutOfBoundsException

    Index: 6, Size: 1

    at java.util.ArrayList.rangeCheck()
  2. Java RT
    ArrayList.get
    1. java.util.ArrayList.rangeCheck(ArrayList.java:653)
    2. java.util.ArrayList.get(ArrayList.java:429)
    2 frames
  3. org.biojava.nbio
    RotationGroup.getRotation
    1. org.biojava.nbio.structure.symmetry.core.RotationGroup.getRotation(RotationGroup.java:53)
    1 frame
  4. eppic.assembly.layout
    ComboLayout.projectLatticeGraph
    1. eppic.assembly.layout.QuaternaryOrientationLayout.projectLatticeGraph(QuaternaryOrientationLayout.java:52)
    2. eppic.assembly.layout.ComboLayout.projectLatticeGraph(ComboLayout.java:34)
    2 frames
  5. eppic.assembly.gui
    LatticeGUIMustache.getGraph2D
    1. eppic.assembly.gui.LatticeGUIMustache.getGraph2D(LatticeGUIMustache.java:394)
    1 frame
  6. Java RT
    Method.invoke
    1. sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    2. sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    3. sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    4. java.lang.reflect.Method.invoke(Method.java:498)
    4 frames
  7. compiler
    DefaultCode.execute
    1. com.github.mustachejava.reflect.ReflectionWrapper.call(ReflectionWrapper.java:64)
    2. com.github.mustachejava.reflect.ReflectionObjectHandler.find(ReflectionObjectHandler.java:85)
    3. com.github.mustachejava.reflect.GuardedBinding.getWrapper(GuardedBinding.java:94)
    4. com.github.mustachejava.reflect.GuardedBinding.createAndGet(GuardedBinding.java:79)
    5. com.github.mustachejava.reflect.GuardedBinding.get(GuardedBinding.java:74)
    6. com.github.mustachejava.codes.DefaultCode.get(DefaultCode.java:139)
    7. com.github.mustachejava.codes.IterableCode.execute(IterableCode.java:40)
    8. com.github.mustachejava.codes.DefaultMustache.run(DefaultMustache.java:32)
    9. com.github.mustachejava.codes.DefaultCode.execute(DefaultCode.java:161)
    10. com.github.mustachejava.codes.DefaultCode.execute(DefaultCode.java:150)
    10 frames
  8. eppic.assembly.gui
    LatticeGUIMustache.execute
    1. eppic.assembly.gui.LatticeGUIMustache.execute(LatticeGUIMustache.java:291)
    1 frame
  9. eppic
    Main.main
    1. eppic.GraphvizRunner.generateFromDot(GraphvizRunner.java:79)
    2. eppic.Main.doWriteAssemblyDiagrams(Main.java:597)
    3. eppic.Main.run(Main.java:945)
    4. eppic.Main.run(Main.java:879)
    5. eppic.Main.main(Main.java:853)
    5 frames