java.lang.IllegalArgumentException

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  • GitHub comment 21#68543816
    via GitHub by stsmall
    ,
  • Null alleles error.
    via GitHub by ankushreddy
    ,
    • java.lang.IllegalArgumentException: Unexpected base in allele bases '*ATAT' at htsjdk.variant.variantcontext.Allele.<init>(Allele.java:162) at htsjdk.variant.variantcontext.Allele.create(Allele.java:234) at htsjdk.variant.variantcontext.Allele.create(Allele.java:355) at picard.vcf.GenotypeConcordance$Alleles.asList(GenotypeConcordance.java:641) at picard.vcf.GenotypeConcordance.writeVcfTuple(GenotypeConcordance.java:431) at picard.vcf.GenotypeConcordance.lambda$doWork$39(GenotypeConcordance.java:333)
    No Bugmate found.