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via GitHub by bastian-wur
, 6 months ago
/annotationHKF5JBBXX_103099-001-025//temp/weaselshark_20171005_115510659_fx2d//jobCDD/000000002001_000000003000.fasta -db data/cdd/3.16/db/Cdd_NCBI -evalue 0.01 -seg no -outfmt 5 Error output from binary: bin/blast/ncbi-blast-2.6.0+/rpsblast: error while loading shared libraries: libgnutls.so.28: cannot open shared object file: No such file or directory
via GitHub by diecasfranco
, 6 months ago
/000000004001_000000005000.fasta -db /home/dfranco/interproscan/interproscan-5.25-64.0/data/cdd/3.16/db/Cdd_NCBI -evalue 0.01 -seg no -outfmt 5 Error output from binary: /home/dfranco/interproscan/interproscan-5.25-64.0/bin/blast/ncbi-blast-2.6.0+/rpsblast: error while loading shared libraries: libgnutls.so.28: cannot open shared object file: No such file or directory
via GitHub by rafiko1
, 2 weeks ago
Command line failed with exit code: 25 Command: bin/prosite/ps_scan.pl -d data/prosite/2018_02/prosite.dat -w bin/prosite/pfsearch -s -m -o gff -y data/prosite/2018_02/prosite_models /home/rafiko1/my_interproscan/interproscan-5.29-68.0/temp/LAPTOP
via GitHub by wangxf133
, 2 months ago
Command line failed with exit code: 25 Command: bin/prosite/ps_scan.pl -d data/prosite/2017_09/prosite.dat -w bin/prosite/pfsearch -s -m -o gff -y data/prosite/2017_09/prosite_models /mnt/e/Interproscan/interproscan-5.28-67.0/temp/DESKTOP
via GitHub by wangzhennan14
, 2 weeks ago
Command line failed with exit code: 17 Command: bin/prosite/ps_scan.pl -d data/prosite/2017_09/prosite.dat -w bin/prosite/pfsearch -s -m -o gff -y data/prosite/2017_09/prosite_models /vol2/agis/ruanjue_group/wangzhennan/assembly/wuhan-reannot/ips
java.lang.IllegalStateException: Command line failed with exit code: 127Command: bin/blast/ncbi-blast-2.6.0+/rpsblast -query /exports/mm-hpc/bacteriologie/bastian/data/metronidazol_resistance_new/HKF5JBBXX_103099-001-025_assembly/ray_run141/opera/ray.gapfiller/annotationHKF5JBBXX_103099-001-025//temp/weaselshark_20171005_115510659_fx2d//jobCDD/000000002001_000000003000.fasta -db data/cdd/3.16/db/Cdd_NCBI -evalue 0.01 -seg no -outfmt 5 Error output from binary:bin/blast/ncbi-blast-2.6.0+/rpsblast: error while loading shared libraries: libgnutls.so.28: cannot open shared object file: No such file or directory at uk.ac.ebi.interpro.scan.management.model.implementations.RunBinaryStep.execute(RunBinaryStep.java:190) at uk.ac.ebi.interpro.scan.jms.activemq.StepExecutionTransactionImpl.executeInTransaction(StepExecutionTransactionImpl.java:86) at sun.reflect.GeneratedMethodAccessor96.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:281) at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:207) at com.sun.proxy.$Proxy106.executeInTransaction(Unknown Source) at uk.ac.ebi.interpro.scan.jms.worker.LocalJobQueueListener.onMessage(LocalJobQueueListener.java:189) at org.springframework.jms.listener.AbstractMessageListenerContainer.doInvokeListener(AbstractMessageListenerContainer.java:746) at org.springframework.jms.listener.AbstractMessageListenerContainer.invokeListener(AbstractMessageListenerContainer.java:684) at org.springframework.jms.listener.AbstractMessageListenerContainer.doExecuteListener(AbstractMessageListenerContainer.java:651) at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.doReceiveAndExecute(AbstractPollingMessageListenerContainer.java:315) at org.springframework.jms.listener.AbstractPollingMessageListenerContainer.receiveAndExecute(AbstractPollingMessageListenerContainer.java:253) at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.invokeListener(DefaultMessageListenerContainer.java:1150) at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.executeOngoingLoop(DefaultMessageListenerContainer.java:1142) at org.springframework.jms.listener.DefaultMessageListenerContainer$AsyncMessageListenerInvoker.run(DefaultMessageListenerContainer.java:1039) at java.lang.Thread.run(Thread.java:748)